RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 GH1P01241 217 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 CYP3A4P08684 503 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 TPBGLP0DKB5 382 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 NMT1P30419 496 aaKnown RBP18.98■□□□□ 0.63
NUP54-205ENST00000507257 RASSF2P50749 326 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 EIF6P56537 245 aaKnown RBP18.98■□□□□ 0.63
NUP54-205ENST00000507257 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.98■□□□□ 0.63
NUP54-205ENST00000507257 RPUSD2Q8IZ73 545 aaKnown RBP18.98■□□□□ 0.63
NUP54-205ENST00000507257 MYCT1Q8N699 235 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 BBOF1Q8ND07 529 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 ZNF564Q8TBZ8 553 aaPredicted RBP18.98■□□□□ 0.63
NUP54-205ENST00000507257 DCAF4Q8WV16 495 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 HSD17B14Q9BPX1 270 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 CCDC77Q9BR77 488 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 NINJ2Q9NZG7 142 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 SERPINB13Q9UIV8 391 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 TMEM110-MUSTN1A8MSY1 372 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 MAPK13O15264 365 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 MSH4O15457 936 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 SPOPO43791 374 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 HNRNPCL1O60812 293 aaKnown RBP18.97■□□□□ 0.63
NUP54-205ENST00000507257 TRIM49P0CI25 452 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 TRIM49CP0CI26 452 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 ACADSP16219 412 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 KCNJ1P48048 391 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 KCTD1Q719H9 257 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 GDAP1Q8TB36 358 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 STRA6Q9BX79 667 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 MYLK2Q9H1R3 596 aa18.97■□□□□ 0.63
NUP54-205ENST00000507257 NOCTQ9UK39 431 aaKnown RBP18.97■□□□□ 0.63
NUP54-205ENST00000507257 KLHL33A6NCF5 533 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 FAM47DPA6NHR8 397 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 FAM86B1E9PN63 330 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 THAP12O43422 761 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 LRRN2O75325 713 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 GAS8O95995 478 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 LMNAP02545 664 aaKnown RBP18.96■□□□□ 0.63
NUP54-205ENST00000507257 FAM86B2P0C5J1 330 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 ATP4AP20648 1035 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 CHKAP35790 457 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 MCCD1P59942 119 aaPredicted RBP18.96■□□□□ 0.63
NUP54-205ENST00000507257 MOGSQ13724 837 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 EPC2Q52LR7 807 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 SGO2Q562F6 1265 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 LARGE2Q8N3Y3 721 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 ASAP3Q8TDY4 903 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 TLE6Q9H808 572 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 ARHGEF10LQ9HCE6 1279 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 ASIC3Q9UHC3 531 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 NAALADL1Q9UQQ1 740 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 QSER1Q2KHR3 1735 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 NRAPQ86VF7 1730 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 ASMTLO95671 621 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 CHRNB2P17787 502 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 ATP2B4P23634 1241 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 FOXN2P32314 431 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 SHMT1P34896 483 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 ZC2HC1CQ53FD0 456 aaPredicted RBP18.96■□□□□ 0.63
NUP54-205ENST00000507257 ANO7Q6IWH7 933 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 APBB1IPQ7Z5R6 666 aaPredicted RBP18.96■□□□□ 0.63
NUP54-205ENST00000507257 TDRPQ86YL5 185 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 CLEC10AQ8IUN9 316 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 FAM71AQ8IYT1 594 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 EPS8L1Q8TE68 723 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 FBXO41Q8TF61 875 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 MKL1Q969V6 931 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 CCDC17Q96LX7 622 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 UIMC1Q96RL1 719 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 P2RX7Q99572 595 aaKnown RBP18.96■□□□□ 0.63
NUP54-205ENST00000507257 UBE2TQ9NPD8 197 aaPredicted RBP18.96■□□□□ 0.63
NUP54-205ENST00000507257 DAGLAQ9Y4D2 1042 aa18.96■□□□□ 0.63
NUP54-205ENST00000507257 MROH7Q68CQ1 1323 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 TAF1LQ8IZX4 1826 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 PRPF4O43172 522 aaKnown RBP eCLIP18.95■□□□□ 0.62
NUP54-205ENST00000507257 RPS6KA4O75676 772 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 NEFHP12036 1026 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 ALDH3A1P30838 453 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 COG2Q14746 738 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 NFIXQ14938 502 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 KYNUQ16719 465 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 MFSD14BQ5SR56 506 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 AP1ARQ63HQ0 302 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 C12orf56Q8IXR9 622 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 MAML1Q92585 1016 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 LRRC37BQ96QE4 947 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 PCDHB18PQ96TA0 734 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 NUP85Q9BW27 656 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 BCAS3Q9H6U6 928 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 NKX1-2Q9UD57 310 aaPredicted RBP18.95■□□□□ 0.62
NUP54-205ENST00000507257 CHKBQ9Y259 395 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 SUGT1Q9Y2Z0 365 aa18.95■□□□□ 0.62
NUP54-205ENST00000507257 POLD1P28340 1107 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 CYP2J2P51589 502 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 ITGA8P53708 1063 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 CYP4A11Q02928 519 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 CENPCQ03188 943 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 RBBP5Q15291 538 aaKnown RBP18.94■□□□□ 0.62
NUP54-205ENST00000507257 VSIG1Q86XK7 387 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 FAM178BQ8IXR5 827 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 CYP4X1Q8N118 509 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms