RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 PSMC2P35998 433 aaKnown RBP15.45■□□□□ 0.06
RNF4-208ENST00000507247 GRM5P41594 1212 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 WNT7BP56706 349 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 SNRNP35Q16560 246 aaKnown RBP15.45■□□□□ 0.06
RNF4-208ENST00000507247 FAM186BQ8IYM0 893 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 PLEKHO2Q8TD55 490 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 DPF3Q92784 378 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 BORCS6Q96GS4 357 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 TRAIPQ9BWF2 469 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 FTHL17Q9BXU8 183 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 TRIM6Q9C030 488 aaPredicted RBP15.45■□□□□ 0.06
RNF4-208ENST00000507247 TSPYL2Q9H2G4 693 aaPredicted RBP15.45■□□□□ 0.06
RNF4-208ENST00000507247 RGS18Q9NS28 235 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 SNTG2Q9NY99 539 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 FRMD4BQ9Y2L6 1034 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 PCDHB2Q9Y5E7 798 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 MEIS3P2A8K0S8 358 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 KCNJ18B7U540 433 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 C9IYK1 514 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 GOLGA6L19H0YKK7 550 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 MAPK13O15264 365 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 STAG3L1P0CL83 205 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 ACRP10323 421 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 ATF7P17544 494 aaPredicted RBP15.44■□□□□ 0.06
RNF4-208ENST00000507247 MARSP56192 900 aaKnown RBP15.44■□□□□ 0.06
RNF4-208ENST00000507247 CYP24A1Q07973 514 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 KCNJ12Q14500 433 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 ENOX2Q16206 610 aaKnown RBP15.44■□□□□ 0.06
RNF4-208ENST00000507247 CCDC40Q4G0X9 1142 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 HABP4Q5JVS0 413 aaKnown RBP15.44■□□□□ 0.06
RNF4-208ENST00000507247 CNKSR3Q6P9H4 555 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 APBB1IPQ7Z5R6 666 aaPredicted RBP15.44■□□□□ 0.06
RNF4-208ENST00000507247 BRSK2Q8IWQ3 736 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 MFSD14AQ96MC6 490 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 APOL6Q9BWW8 343 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 RNF39Q9H2S5 420 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 KIAA1586Q9HCI6 787 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 TTC3P53804 2025 aa15.44■□□□□ 0.06
RNF4-208ENST00000507247 A0A0U1RQF3 1178 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.43■□□□□ 0.06
RNF4-208ENST00000507247 ZNF233A6NK53 670 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 ENPP3O14638 875 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 GNA14O95837 355 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 CLTAP09496 248 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 CXCL8P10145 99 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 AKAP5P24588 427 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 RAB27AP51159 221 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 TCP11X2Q5H9J9 407 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 FRMD5Q7Z6J6 570 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 MRPL10Q7Z7H8 261 aaKnown RBP15.43■□□□□ 0.06
RNF4-208ENST00000507247 ECHDC2Q86YB7 292 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 CREBRFQ8IUR6 639 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 FAM114A1Q8IWE2 563 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 LPPQ93052 612 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 CXCL16Q9H2A7 254 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 IL23AQ9NPF7 189 aa15.43■□□□□ 0.06
RNF4-208ENST00000507247 RBAKQ9NYW8 714 aaPredicted RBP15.43■□□□□ 0.06
RNF4-208ENST00000507247 COLQQ9Y215 455 aaPredicted RBP15.43■□□□□ 0.06
RNF4-208ENST00000507247 FSD2A1L4K1 749 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 ZNF623O75123 536 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 RECQL4O94761 1208 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 IBSPP21815 317 aaPredicted RBP15.42■□□□□ 0.06
RNF4-208ENST00000507247 EPHB4P54760 987 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 FAM189BP81408 668 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 FPGSQ05932 587 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 BFSP1Q12934 665 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 PPIGQ13427 754 aaKnown RBP eCLIP15.42■□□□□ 0.064e-10■■□□□ 12.4
RNF4-208ENST00000507247 KRT31Q15323 416 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 KYAT1Q16773 422 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 SLC10A6Q3KNW5 377 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 SLC24A5Q71RS6 500 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 C16orf59Q7L2K0 433 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 APTXQ7Z2E3 356 aaKnown RBP15.42■□□□□ 0.06
RNF4-208ENST00000507247 ZNF598Q86UK7 904 aaKnown RBP15.42■□□□□ 0.06
RNF4-208ENST00000507247 TRIM59Q8IWR1 403 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 ACAP3Q96P50 834 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 CCDC94Q9BW85 323 aaPredicted RBP15.42■□□□□ 0.06
RNF4-208ENST00000507247 RPF1Q9H9Y2 349 aaKnown RBP15.42■□□□□ 0.06
RNF4-208ENST00000507247 PDE11AQ9HCR9 933 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 C1orf112Q9NSG2 853 aa15.42■□□□□ 0.06
RNF4-208ENST00000507247 MAGEC2Q9UBF1 373 aaPredicted RBP15.42■□□□□ 0.06
RNF4-208ENST00000507247 ARMCX3Q9UH62 379 aaPredicted RBP15.42■□□□□ 0.06
RNF4-208ENST00000507247 TDRD15B5MCY1 1934 aaKnown RBP15.42■□□□□ 0.06
RNF4-208ENST00000507247 TTC26A0AVF1 554 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 LACTBL1A8MY62 500 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 PFKMP08237 780 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 TRIM49P0CI25 452 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 TRIM49CP0CI26 452 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 ITGA4P13612 1032 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 CDK11BP21127 795 aaKnown RBP15.41■□□□□ 0.06
RNF4-208ENST00000507247 EEF1GP26641 437 aaKnown RBP15.41■□□□□ 0.06
RNF4-208ENST00000507247 MTIF2P46199 727 aaKnown RBP15.41■□□□□ 0.06
RNF4-208ENST00000507247 VAMP7P51809 220 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 MCCD1P59942 119 aaPredicted RBP15.41■□□□□ 0.06
RNF4-208ENST00000507247 TPM4P67936 248 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 DLG4P78352 724 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 PSMD6Q15008 389 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 C1orf220Q5T0J3 134 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.41■□□□□ 0.06
RNF4-208ENST00000507247 AGMOQ6ZNB7 445 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms