RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 RSPH1Q8WYR4 309 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 ATOH1Q92858 354 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-209ENST00000506630 CHAMP1Q96JM3 812 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 TMEM134Q9H6X4 195 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 PARVGQ9HBI0 331 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 KCNG1Q9UIX4 513 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 PCDHA7Q9UN72 937 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 RBM19Q9Y4C8 960 aaKnown RBP14.41□□□□□ -0.1
TCOF1-209ENST00000506630 K7ENM7 598 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 ZC3H11AO75152 810 aaKnown RBP eCLIP14.4□□□□□ -0.1
TCOF1-209ENST00000506630 SRGAP2BP0DMP2 458 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 AVPR2P30518 371 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 PBX3P40426 434 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 RBM10P98175 930 aaKnown RBP14.4□□□□□ -0.1
TCOF1-209ENST00000506630 STRN3Q13033 797 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 AXDND1Q5T1B0 1012 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-209ENST00000506630 ATF7IP2Q5U623 682 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 EEF1DP3Q658K8 133 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 SHC4Q6S5L8 630 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 TAS1R3Q7RTX0 852 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 ZBTB33Q86T24 672 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 SPIRE2Q8WWL2 714 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 SPATA32Q96LK8 384 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 ZNF558Q96NG5 402 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 CDCA3Q99618 268 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-209ENST00000506630 MRPL4Q9BYD3 311 aaKnown RBP14.4□□□□□ -0.1
TCOF1-209ENST00000506630 GBP3Q9H0R5 595 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 UBN1Q9NPG3 1134 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 TBC1D13Q9NVG8 400 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 FAM86C1Q9NVL1 165 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 FAM13BQ9NYF5 915 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 PARP2Q9UGN5 583 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 ANK1P16157 1881 aa14.4□□□□□ -0.1
TCOF1-209ENST00000506630 H0YCG3 227 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 PER2O15055 1255 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 AKAP5P24588 427 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 MLH1P40692 756 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 NCKAP1LP55160 1127 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 NUCB2P80303 420 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 PTPN21Q16825 1174 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 DCAF4L1Q3SXM0 396 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 NT5DC1Q5TFE4 455 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 PDE12Q6L8Q7 609 aaKnown RBP14.39□□□□□ -0.11
TCOF1-209ENST00000506630 KCNT2Q6UVM3 1135 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 TMEM161BQ8NDZ6 487 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 LEO1Q8WVC0 666 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-209ENST00000506630 DDX12PQ92771 950 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 DHX58Q96C10 678 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 ASIC4Q96FT7 647 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 GAD1Q99259 594 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 TLR9Q9NR96 1032 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 RCOR1Q9UKL0 485 aa14.39□□□□□ -0.11
TCOF1-209ENST00000506630 ARL5CA6NH57 179 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 MYMKA6NI61 221 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 TRAK2O60296 914 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 FGF18O76093 207 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 POMCP01189 267 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 MAPTP10636 758 aaKnown RBP14.38□□□□□ -0.11
TCOF1-209ENST00000506630 PPM1AP35813 382 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 SCNN1GP51170 649 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 AFF1P51825 1210 aaKnown RBP14.38□□□□□ -0.11
TCOF1-209ENST00000506630 ZNF131P52739 623 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 NUBP1P53384 320 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 VCPP55072 806 aaKnown RBP14.38□□□□□ -0.11
TCOF1-209ENST00000506630 BCAR1P56945 870 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 ERVFC1P60507 584 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 FOXK2Q01167 660 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 ZNF568Q3ZCX4 644 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 RESP18Q5W5W9 173 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 HAUS6Q7Z4H7 955 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 APBB1IPQ7Z5R6 666 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-209ENST00000506630 SUSD6Q92537 303 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 BICD1Q96G01 975 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 ZFP42Q96MM3 310 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 FAM193BQ96PV7 902 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-209ENST00000506630 RPS6KC1Q96S38 1066 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 ACO2Q99798 780 aaKnown RBP14.38□□□□□ -0.11
TCOF1-209ENST00000506630 NTPCRQ9BSD7 190 aaKnown RBP14.38□□□□□ -0.11
TCOF1-209ENST00000506630 TARS2Q9BW92 718 aaKnown RBP14.38□□□□□ -0.11
TCOF1-209ENST00000506630 NRDE2Q9H7Z3 1164 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 SNTG2Q9NY99 539 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 TNFSF13BQ9Y275 285 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 GIT1Q9Y2X7 761 aa14.38□□□□□ -0.11
TCOF1-209ENST00000506630 WDFY4Q6ZS81 3184 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 NT5C1B-RDH14C9J2C7 533 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 POLR2DO15514 142 aaKnown RBP14.37□□□□□ -0.11
TCOF1-209ENST00000506630 HARSP12081 509 aaKnown RBP14.37□□□□□ -0.11
TCOF1-209ENST00000506630 IDEP14735 1019 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 ALDH7A1P49419 539 aaKnown RBP14.37□□□□□ -0.11
TCOF1-209ENST00000506630 E2F4Q16254 413 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 DUSP6Q16828 381 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 TPRNQ4KMQ1 711 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 SFR1Q86XK3 245 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 ZNF280BQ86YH2 543 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 IQUBQ8NA54 791 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 STAMQ92783 540 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 TNMDQ9H2S6 317 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 CUEDC2Q9H467 287 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 KLK14Q9P0G3 267 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms