RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 WIPI1Q5MNZ9 446 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 ZNF697Q5TEC3 545 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 C11orf74Q86VG3 221 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 FCHSD1Q86WN1 690 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CCDC13Q8IYE1 715 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 TRIM58Q8NG06 486 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 RASSF8Q8NHQ8 419 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 MIPOL1Q8TD10 442 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 SP7Q8TDD2 431 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CHAC2Q8WUX2 184 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 RSAD2Q8WXG1 361 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 TTC9Q92623 222 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 INTS4Q96HW7 963 aaKnown RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 PARVGQ9HBI0 331 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 C17orf113A0A1B0GUU1 675 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 PABPN1LA6NDY0 278 aaKnown RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 MYO1FO00160 1098 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 NEMP1O14524 444 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 AXIN1O15169 862 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CYTH3O43739 400 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 SOD2P04179 222 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 POLBP06746 335 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CCT5P48643 541 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 LIG3P49916 1009 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 BASP1P80723 227 aaKnown RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 RAB33AQ14088 237 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 USP41Q3LFD5 358 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CAPRIN2Q6IMN6 1127 aaKnown RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 IRGCQ6NXR0 463 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 ADGRD1Q6QNK2 874 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 UBE3BQ7Z3V4 1068 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 MTDHQ86UE4 582 aaKnown RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 RAB11FIP4Q86YS3 637 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 FAM20CQ8IXL6 584 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CNTROBQ8N137 903 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 TMEM57Q8N5G2 664 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 ANKS1AQ92625 1134 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 DPF2Q92785 391 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 PTPRN2Q92932 1015 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 KIAA1191Q96A73 305 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CHFRQ96EP1 664 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 DDX11Q96FC9 970 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 OSBPL10Q9BXB5 764 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 RBM38Q9H0Z9 239 aaKnown RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 UCK1Q9HA47 277 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 OSGEPQ9NPF4 335 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 ANLNQ9NQW6 1124 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 IL1RAPL1Q9NZN1 696 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CRNNQ9UBG3 495 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 FBXL21Q9UKT6 434 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 TRPC5Q9UL62 973 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 TMCC3Q9ULS5 477 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 SYCE3A1L190 88 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 hCG_1984214I3L0E3 225 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 ZNF862O60290 1169 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 DNAJA2O60884 412 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 SKAP2O75563 359 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 FGFR1P11362 822 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 SDHBP21912 280 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 SFPQP23246 707 aaKnown RBP eCLIP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 FAAP100Q0VG06 881 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 AIMP1Q12904 312 aaKnown RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 TNIP1Q15025 636 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 LONRF2Q1L5Z9 754 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 TWISTNBQ3B726 338 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 ARSHQ5FYA8 562 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 SIGIRRQ6IA17 410 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 FAM180BQ6P0A1 224 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 C16orf54Q6UWD8 224 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 ZNF572Q7Z3I7 529 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 TMC6Q7Z403 805 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 LSMEM1Q8N8F7 131 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 WDR66Q8TBY9 1149 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 USP7Q93009 1102 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 TP53INP1Q96A56 240 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 TSGA13Q96PP4 275 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 SLC40A1Q9NP59 571 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 GIT1Q9Y2X7 761 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 TTC24A2A3L6 582 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 IQCA1LA6NCM1 817 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 LRRC14BA6NHZ5 514 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 LZTS3O60299 673 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 KDM1AO60341 852 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 H2AFYO75367 372 aaKnown RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 LPLP06858 475 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CTRB1P17538 263 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 FUT4P22083 530 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 ZNF75DP51815 510 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 WDR4P57081 412 aaKnown RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 USP46P62068 366 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 ETF1P62495 437 aaKnown RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 NNTQ13423 1086 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CUL3Q13618 768 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CDONQ4KMG0 1287 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 SNX30Q5VWJ9 437 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CTRB2Q6GPI1 263 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 FAM117BQ6P1L5 589 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 CYB5D1Q6P9G0 228 aa2.46□□□□□ -2.02
NEDD4-205ENST00000506154 NOP9Q86U38 636 aaKnown RBP2.46□□□□□ -2.02
NEDD4-205ENST00000506154 LRRC8AQ8IWT6 810 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms