RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 NT5C1B-RDH14C9J2C7 533 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 AP5Z1O43299 807 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 ZNF862O60290 1169 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 RHOBTB3O94955 611 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 WEE2P0C1S8 567 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 SKIP12755 728 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 CDC25AP30304 524 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 PPP1R2P41236 205 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 AFMP43652 599 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 PRR16Q569H4 304 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 TRMT1LQ7Z2T5 733 aaKnown RBP11.82□□□□□ -0.52
CPNE4-206ENST00000505957 PPFIBP1Q86W92 1011 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 C12orf76Q8N812 135 aaPredicted RBP11.82□□□□□ -0.52
CPNE4-206ENST00000505957 RASSF8Q8NHQ8 419 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 ERMNQ8TAM6 284 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 SNX29Q8TEQ0 813 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 LRRC15Q8TF66 581 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 SLC5A5Q92911 643 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
CPNE4-206ENST00000505957 IGSF21Q96ID5 467 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 TRIM9Q9C026 710 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 SMOC2Q9H3U7 446 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 BLOC1S4Q9NUP1 217 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 STK39Q9UEW8 545 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 VAV3Q9UKW4 847 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 SAMM50Q9Y512 469 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 SPTBN4Q9H254 2564 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 MYO10Q9HD67 2058 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 A0A087WWV3 80 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 PVALEFA0A1B0GWK0 134 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 MSH4O15457 936 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 KLRC4O43908 158 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 MARCH6O60337 910 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 RPN1P04843 607 aaKnown RBP11.81□□□□□ -0.52
CPNE4-206ENST00000505957 GALTP07902 379 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 EPCAMP16422 314 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 AOC1P19801 751 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 SFNP31947 248 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 CA8P35219 290 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 PHKA2P46019 1235 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 ZNF75DP51815 510 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 TBC1D8BQ0IIM8 1120 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 PPP2R5CQ13362 524 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 CUL4BQ13620 913 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 TARBP2Q15633 366 aaKnown RBP11.81□□□□□ -0.52
CPNE4-206ENST00000505957 ZNF658Q5TYW1 1059 aaPredicted RBP11.81□□□□□ -0.52
CPNE4-206ENST00000505957 CWF19L1Q69YN2 538 aaKnown RBP11.81□□□□□ -0.52
CPNE4-206ENST00000505957 B3GNT9Q6UX72 402 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 OTOP3Q7RTS5 596 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 FRMD5Q7Z6J6 570 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 GPR149Q86SP6 731 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 NLRP7Q8WX94 980 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 LARP4BQ92615 738 aaKnown RBP11.81□□□□□ -0.52
CPNE4-206ENST00000505957 RAD54LQ92698 747 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 CCDC47Q96A33 483 aaKnown RBP11.81□□□□□ -0.52
CPNE4-206ENST00000505957 TRIM44Q96DX7 344 aaPredicted RBP11.81□□□□□ -0.52
CPNE4-206ENST00000505957 CDK5RAP3Q96JB5 506 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 SCLT1Q96NL6 688 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 RIT2Q99578 217 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 RTP3Q9BQQ7 232 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 GCOM2Q9BZD3 368 aaPredicted RBP11.81□□□□□ -0.52
CPNE4-206ENST00000505957 SFXN1Q9H9B4 322 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 MYO15AQ9UKN7 3530 aa11.81□□□□□ -0.52
CPNE4-206ENST00000505957 IGKV6-21A0A0C4DH24 114 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 ZNF623O75123 536 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 ZC3H11AO75152 810 aaKnown RBP eCLIP11.8□□□□□ -0.52
CPNE4-206ENST00000505957 PSMD10O75832 226 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 TPM3P06753 285 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 NPR3P17342 541 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 FGFR4P22455 802 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 SFPQP23246 707 aaKnown RBP eCLIP11.8□□□□□ -0.52
CPNE4-206ENST00000505957 RPA1P27694 616 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 JAK3P52333 1124 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 PRKCEQ02156 737 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 TDGQ13569 410 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 GLB1LQ6UWU2 654 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 C15orf39Q6ZRI6 1047 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 CCDC149Q6ZUS6 474 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 SV2BQ7L1I2 683 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 TMEM173Q86WV6 379 aaPredicted RBP11.8□□□□□ -0.52
CPNE4-206ENST00000505957 CCDC105Q8IYK2 499 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 ADSSL1Q8N142 457 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 ZNF668Q96K58 619 aaPredicted RBP11.8□□□□□ -0.52
CPNE4-206ENST00000505957 POLR3CQ9BUI4 534 aaPredicted RBP11.8□□□□□ -0.52
CPNE4-206ENST00000505957 NIFKQ9BYG3 293 aaKnown RBP11.8□□□□□ -0.52
CPNE4-206ENST00000505957 INO80BQ9C086 356 aaPredicted RBP11.8□□□□□ -0.52
CPNE4-206ENST00000505957 HSD3B7Q9H2F3 369 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 NRDE2Q9H7Z3 1164 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 TBC1D13Q9NVG8 400 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 DUSP12Q9UNI6 340 aa11.8□□□□□ -0.52
CPNE4-206ENST00000505957 GVINP1Q7Z2Y8 2422 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.79□□□□□ -0.52
CPNE4-206ENST00000505957 GOLGA6L6A8MZA4 724 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 PPP1R3GB7ZBB8 358 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 ZNF18P17022 549 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 ID4P47928 161 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 RAB27AP51159 221 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 PTPN14Q15678 1187 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 NOMO2Q5JPE7 1267 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 FOXR2Q6PJQ5 311 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms