RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 MAN1C1Q9NR34 630 aa24.5■■□□□ 1.51
SUDS3P1-201ENST00000505831 FNIP2Q9P278 1114 aa24.5■■□□□ 1.51
SUDS3P1-201ENST00000505831 KIAA1024Q9UPX6 916 aa24.5■■□□□ 1.51
SUDS3P1-201ENST00000505831 USP20Q9Y2K6 914 aa24.5■■□□□ 1.51
SUDS3P1-201ENST00000505831 NOTCH4Q99466 2003 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 USP34Q70CQ2 3546 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 PRKCBP05771 671 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 TUSC3Q13454 348 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 GNL2Q13823 731 aaKnown RBP24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 IL17AQ16552 155 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 USP41Q3LFD5 358 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 CYP26C1Q6V0L0 522 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 ALYREFQ86V81 257 aaKnown RBP24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 RABGGTAQ92696 567 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 B3GALT6Q96L58 329 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 PRRX2Q99811 253 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 SMOC2Q9H3U7 446 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 SNTG2Q9NY99 539 aa24.49■■□□□ 1.51
SUDS3P1-201ENST00000505831 GLUD1P00367 558 aa24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 PDGFBP01127 241 aaPredicted RBP24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 ASGR2P07307 311 aa24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 AVPR2P30518 371 aa24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 VCPP55072 806 aaKnown RBP24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 EEF1DP3Q658K8 133 aa24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 DEPTORQ8TB45 409 aa24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 KIFAP3Q92845 792 aa24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 DDX19AQ9NUU7 478 aaKnown RBP24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 CACNG4Q9UBN1 327 aa24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 STK24Q9Y6E0 443 aa24.48■■□□□ 1.51
SUDS3P1-201ENST00000505831 CCDC195A0A1B0GUA6 201 aa24.47■■□□□ 1.51
SUDS3P1-201ENST00000505831 LAD1O00515 517 aa24.47■■□□□ 1.51
SUDS3P1-201ENST00000505831 EFNA5P52803 228 aa24.47■■□□□ 1.51
SUDS3P1-201ENST00000505831 TCF15Q12870 199 aa24.47■■□□□ 1.51
SUDS3P1-201ENST00000505831 HSP90AA2PQ14568 343 aaPredicted RBP24.47■■□□□ 1.51
SUDS3P1-201ENST00000505831 NT5DC1Q5TFE4 455 aa24.47■■□□□ 1.51
SUDS3P1-201ENST00000505831 CCDC149Q6ZUS6 474 aa24.47■■□□□ 1.51
SUDS3P1-201ENST00000505831 OTOP3Q7RTS5 596 aa24.47■■□□□ 1.51
SUDS3P1-201ENST00000505831 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.47■■□□□ 1.51
SUDS3P1-201ENST00000505831 DPP7Q9UHL4 492 aa24.47■■□□□ 1.51
SUDS3P1-201ENST00000505831 TADA2AO75478 443 aa24.46■■□□□ 1.51
SUDS3P1-201ENST00000505831 RECQL4O94761 1208 aa24.46■■□□□ 1.51
SUDS3P1-201ENST00000505831 THP07101 528 aa24.46■■□□□ 1.51
SUDS3P1-201ENST00000505831 PRPHP41219 470 aa24.46■■□□□ 1.51
SUDS3P1-201ENST00000505831 ZNF707Q96C28 371 aaPredicted RBP24.46■■□□□ 1.51
SUDS3P1-201ENST00000505831 ACSF2Q96CM8 615 aaPredicted RBP24.46■■□□□ 1.51
SUDS3P1-201ENST00000505831 IFT74Q96LB3 600 aa24.46■■□□□ 1.51
SUDS3P1-201ENST00000505831 MMTAG2Q9BU76 263 aaKnown RBP24.46■■□□□ 1.51
SUDS3P1-201ENST00000505831 KIFC3Q9BVG8 833 aa24.46■■□□□ 1.51
SUDS3P1-201ENST00000505831 PLEKHA4Q9H4M7 779 aa24.46■■□□□ 1.51
SUDS3P1-201ENST00000505831 TGM5O43548 720 aa24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 SPATA31D3P0C874 917 aa24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 RABEP1Q15276 862 aa24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 SPATA31D4Q6ZUB0 917 aa24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 PALB2Q86YC2 1186 aa24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 DAW1Q8N136 415 aa24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 SNX29Q8TEQ0 813 aa24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 RIN2Q8WYP3 895 aaPredicted RBP24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 ADPGKQ9BRR6 497 aa24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 RAB34Q9BZG1 259 aa24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 WDR6Q9NNW5 1121 aaKnown RBP24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 ZFHX2Q9C0A1 2572 aaPredicted RBP24.45■■□□□ 1.5
SUDS3P1-201ENST00000505831 SPDYE4A6NLX3 237 aa24.44■■□□□ 1.5
SUDS3P1-201ENST00000505831 PP2D1A8MPX8 630 aa24.44■■□□□ 1.5
SUDS3P1-201ENST00000505831 E9PMD0 336 aa24.44■■□□□ 1.5
SUDS3P1-201ENST00000505831 N4BP1O75113 896 aaKnown RBP24.44■■□□□ 1.5
SUDS3P1-201ENST00000505831 RFPL2O75678 378 aa24.44■■□□□ 1.5
SUDS3P1-201ENST00000505831 MRE11P49959 708 aa24.44■■□□□ 1.5
SUDS3P1-201ENST00000505831 RTP2Q5QGT7 225 aa24.44■■□□□ 1.5
SUDS3P1-201ENST00000505831 NT5C3AQ9H0P0 336 aa24.44■■□□□ 1.5
SUDS3P1-201ENST00000505831 DNM3Q9UQ16 869 aa24.44■■□□□ 1.5
SUDS3P1-201ENST00000505831 SF3B1O75533 1304 aaKnown RBP eCLIP24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 CASTOR2A6NHX0 329 aa24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 K7ERI5 159 aa24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 KIF4AO95239 1232 aa24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 CENPBP07199 599 aaPredicted RBP24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 RPL17P18621 184 aaKnown RBP24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 CDC25AP30304 524 aa24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 PTPN5P54829 565 aa24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 DCAF4L1Q3SXM0 396 aa24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 ATF7IP2Q5U623 682 aa24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 ELMSAN1Q6PJG2 1045 aa24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 LNX1Q8TBB1 728 aaPredicted RBP24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 CLSTN3Q9BQT9 956 aa24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 PTPRHQ9HD43 1115 aa24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 TNFSF13BQ9Y275 285 aa24.43■■□□□ 1.5
SUDS3P1-201ENST00000505831 RIF1Q5UIP0 2472 aaKnown RBP24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 MYH15Q9Y2K3 1946 aa24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 MYBP10242 640 aa24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 LIG1P18858 919 aa24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 NPTX2P47972 431 aa24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 NUBP1P53384 320 aa24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 CREMQ03060 361 aa24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 MAPK7Q13164 816 aa24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 KRT79Q5XKE5 535 aa24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 PRSS55Q6UWB4 352 aaPredicted RBP24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 DTHD1Q6ZMT9 781 aa24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 C1orf186Q6ZWK4 172 aa24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 KCNK18Q7Z418 384 aa24.42■■□□□ 1.5
SUDS3P1-201ENST00000505831 PIK3R5Q8WYR1 880 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms