RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ATRIPQ8WXE1 791 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 NAPGQ99747 312 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 ACO2Q99798 780 aaKnown RBP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 FAM213AQ9BRX8 229 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 IFIH1Q9BYX4 1025 aaKnown RBP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 CCDC113Q9H0I3 377 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 FZD8Q9H461 694 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 TUT1Q9H6E5 874 aaKnown RBP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 GJD2Q9UKL4 321 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 GUCA1BQ9UMX6 200 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 GNEQ9Y223 722 aaKnown RBP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 ATP8B3O60423 1300 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 A6NJR5 290 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 BTNL10A8MVZ5 291 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 F8VZ95 297 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 CLDN3O15551 220 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 DYNC1LI2O43237 492 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 TACC1O75410 805 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 GNRH1P01148 92 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 IGHA2P01877 340 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 ZNF865P0CJ78 1059 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 MATR3P43243 847 aaKnown RBP eCLIP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 PSMC4P43686 418 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 MFAP3P55082 362 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 POU5F1Q01860 360 aaKnown RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 PTK2Q05397 1052 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 BMS1Q14692 1282 aaKnown RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 FAM187BQ17R55 369 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 PHLDB3Q6NSJ2 640 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 GJB7Q6PEY0 223 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 MTHFD1LQ6UB35 978 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 CRELD2Q6UXH1 353 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 C15orf39Q6ZRI6 1047 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 SV2AQ7L0J3 742 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 ZNF571Q7Z3V5 609 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 RHPN2Q8IUC4 686 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 METTL13Q8N6R0 699 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 FBXL13Q8NEE6 735 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 SECISBP2LQ93073 1101 aaKnown RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 CCDC127Q96BQ5 260 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 ZBTB45Q96K62 511 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 NT5C1BQ96P26 610 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 FNBP1Q96RU3 617 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 APBA2Q99767 749 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 MSTO1Q9BUK6 570 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 IRX2Q9BZI1 471 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 LACRTQ9GZZ8 138 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 UBE2TQ9NPD8 197 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 PRMT7Q9NVM4 692 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 RAB20Q9NX57 234 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 SRRDQ9UH36 339 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 AJAP1Q9UKB5 411 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 INTUQ9ULD6 942 aa8.71□□□□□ -1.02
COL4A5-208ENST00000505728 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-208ENST00000505728 A0A087X0T9 212 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 RCCD1A6NED2 376 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 H0YGN5 161 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 FOXN3O00409 490 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-208ENST00000505728 TNPO2O14787 897 aaKnown RBP8.7□□□□□ -1.02
COL4A5-208ENST00000505728 OGTO15294 1046 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 EVI5O60447 810 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 ABL1P00519 1130 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 C4BPAP04003 597 aaKnown RBP8.7□□□□□ -1.02
COL4A5-208ENST00000505728 FAM228BP0C875 321 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 DLATP10515 647 aaKnown RBP8.7□□□□□ -1.02
COL4A5-208ENST00000505728 CYP2B6P20813 491 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 TNFAIP3P21580 790 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 PHKA2P46019 1235 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 CLCN3P51790 818 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 PRMT2P55345 433 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 FCGRTP55899 365 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 NLRP11P59045 1033 aaKnown RBP8.7□□□□□ -1.02
COL4A5-208ENST00000505728 IGBP1P78318 339 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 ARID5AQ03989 594 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 GFPT1Q06210 699 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-208ENST00000505728 MCL1Q07820 350 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 PPFIA1Q13136 1202 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 NAB2Q15742 525 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 ZACNQ401N2 412 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 PRAMEF19Q5SWL8 479 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 TSHZ1Q6ZSZ6 1077 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 ENOSF1Q7L5Y1 443 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 SRGAP1Q7Z6B7 1085 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 BRSK2Q8IWQ3 736 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 TRIM58Q8NG06 486 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 TRAPPC12Q8WVT3 735 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 SEMA4DQ92854 862 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 MAP7D2Q96T17 732 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 POP1Q99575 1024 aaKnown RBP8.7□□□□□ -1.02
COL4A5-208ENST00000505728 CGRRF1Q99675 332 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 TCHPQ9BT92 498 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 GPR88Q9GZN0 384 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 HAPLN2Q9GZV7 340 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 AP5M1Q9H0R1 490 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 PTPRHQ9HD43 1115 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 RBAKQ9NYW8 714 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-208ENST00000505728 FLRT1Q9NZU1 646 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 ADAMTS1Q9UHI8 967 aa8.7□□□□□ -1.02
COL4A5-208ENST00000505728 CDC23Q9UJX2 597 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms