RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 NOL3O60936 208 aaKnown RBP7.78□□□□□ -1.16
CDH9-202ENST00000505020 PIAS2O75928 621 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 GLRX3O76003 335 aaKnown RBP7.78□□□□□ -1.16
CDH9-202ENST00000505020 COL6A2P12110 1019 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 RAG1P15918 1043 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 IFNAR1P17181 557 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 ITGA6P23229 1130 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 ADSLP30566 484 aaPredicted RBP7.78□□□□□ -1.16
CDH9-202ENST00000505020 ARSDP51689 593 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 CD83Q01151 205 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 FAAP100Q0VG06 881 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 KLHDC7AQ5VTJ3 777 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 VASH1Q7L8A9 365 aaPredicted RBP7.78□□□□□ -1.16
CDH9-202ENST00000505020 FBXO15Q8NCQ5 510 aaPredicted RBP7.78□□□□□ -1.16
CDH9-202ENST00000505020 BBOF1Q8ND07 529 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 RFWD2Q8NHY2 731 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 BRI3BPQ8WY22 251 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 VPS50Q96JG6 964 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 ATP6V0BQ99437 205 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 SPSB2Q99619 263 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 TSEN34Q9BSV6 310 aaKnown RBP7.78□□□□□ -1.16
CDH9-202ENST00000505020 PLVAPQ9BX97 442 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 EMILIN2Q9BXX0 1053 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 WNT5BQ9H1J7 359 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 KCND1Q9NSA2 647 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 AATFQ9NY61 560 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDH9-202ENST00000505020 ACTR3BQ9P1U1 418 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 HOOK1Q9UJC3 728 aaKnown RBP7.78□□□□□ -1.16
CDH9-202ENST00000505020 SLC4A4Q9Y6R1 1079 aa7.78□□□□□ -1.16
CDH9-202ENST00000505020 SPAG9O60271 1321 aaKnown RBP7.77□□□□□ -1.17
CDH9-202ENST00000505020 SYNCRIPO60506 623 aaKnown RBP7.77□□□□□ -1.17
CDH9-202ENST00000505020 CDKL5O76039 1030 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 MLYCDO95822 493 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 C6P13671 934 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 IDUAP35475 653 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 GPR3P46089 330 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 RPL6Q02878 288 aaKnown RBP7.77□□□□□ -1.17
CDH9-202ENST00000505020 CREMQ03060 361 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 NFE2L1Q14494 772 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 MXD4Q14582 209 aaPredicted RBP7.77□□□□□ -1.17
CDH9-202ENST00000505020 CLPPQ16740 277 aaPredicted RBP7.77□□□□□ -1.17
CDH9-202ENST00000505020 SPRED3Q2MJR0 410 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 FLYWCH1Q4VC44 716 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 MAP3K21Q5TCX8 1036 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 SNX30Q5VWJ9 437 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 OVOS1Q6IE37 1185 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 ACAD10Q6JQN1 1059 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 FDX2Q6P4F2 183 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 ZNF227Q86WZ6 799 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 HDAC7Q8WUI4 952 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 ST8SIA4Q92187 359 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 TUBGCP3Q96CW5 907 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 ATG4CQ96DT6 458 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 HSH2DQ96JZ2 352 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 SUSD3Q96L08 255 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 NOX5Q96PH1 765 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 KRTAP3-3Q9BYR6 98 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 KRTAP3-2Q9BYR7 98 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 ZFYVE1Q9HBF4 777 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 TM9SF3Q9HD45 589 aa7.77□□□□□ -1.17
CDH9-202ENST00000505020 UBA2Q9UBT2 640 aaPredicted RBP7.77□□□□□ -1.17
CDH9-202ENST00000505020 METTL12A8MUP2 240 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 KINO60870 393 aaKnown RBP7.76□□□□□ -1.17
CDH9-202ENST00000505020 BEST1O76090 585 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 NME1P15531 152 aaKnown RBP7.76□□□□□ -1.17
CDH9-202ENST00000505020 BMP6P22004 513 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 PTPN11Q06124 597 aaPredicted RBP7.76□□□□□ -1.17
CDH9-202ENST00000505020 MAP3K12Q12852 859 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 EFR3AQ14156 821 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 POLD3Q15054 466 aaPredicted RBP7.76□□□□□ -1.17
CDH9-202ENST00000505020 ANO6Q4KMQ2 910 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 SLC9C2Q5TAH2 1124 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 CEP135Q66GS9 1140 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 DIEXFQ68CQ4 756 aaKnown RBP7.76□□□□□ -1.17
CDH9-202ENST00000505020 GPR153Q6NV75 609 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 TAF2Q6P1X5 1199 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 TMEM154Q6P9G4 183 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 CENPQQ7L2Z9 268 aaPredicted RBP7.76□□□□□ -1.17
CDH9-202ENST00000505020 THAP5Q7Z6K1 395 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 CCNJLQ8IV13 435 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 CCDC13Q8IYE1 715 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 THNSL1Q8IYQ7 743 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 SLC7A5P1Q8MH63 180 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 SUPT20HQ8NEM7 779 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 LINS1Q8NG48 757 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 RHPN1Q8TCX5 695 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 GRK7Q8WTQ7 553 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 SLC5A5Q92911 643 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 C18orf8Q96DM3 657 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 ZNF764Q96H86 408 aaPredicted RBP7.76□□□□□ -1.17
CDH9-202ENST00000505020 BTBD1Q9H0C5 482 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 TSPYL1Q9H0U9 437 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 STMN4Q9H169 189 aaPredicted RBP7.76□□□□□ -1.17
CDH9-202ENST00000505020 DCP1AQ9NPI6 582 aaPredicted RBP7.76□□□□□ -1.17
CDH9-202ENST00000505020 CD93Q9NPY3 652 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 C11orf16Q9NQ32 467 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 SIRT5Q9NXA8 310 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 TAS2R3Q9NYW6 316 aa7.76□□□□□ -1.17
CDH9-202ENST00000505020 USP36Q9P275 1121 aaKnown RBP7.76□□□□□ -1.17
CDH9-202ENST00000505020 FAM153AQ9UHL3 310 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms