RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 DGKIO75912 1065 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 AKAP3O75969 853 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 MCF2P10911 925 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 GARTP22102 1010 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 IGFBP6P24592 240 aaPredicted RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 CCNE1P24864 410 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ABCD1P33897 745 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 GRM5P41594 1212 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 CASP4P49662 377 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 NLRP12P59046 1061 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 SNRPFP62306 86 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 MLLT1Q03111 559 aaPredicted RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 IQCB1Q15051 598 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ENOX2Q16206 610 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 EDRF1Q3B7T1 1238 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 SLC10A6Q3KNW5 377 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 SEZ6Q53EL9 994 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 NOTUMQ6P988 496 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 PSRC1Q6PGN9 363 aaPredicted RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 CD300LGQ6UXG3 332 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 APTXQ7Z2E3 356 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 SPRED2Q7Z698 418 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ZBTB8OSQ8IWT0 167 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 NELFCDQ8IXH7 590 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 RPUSD2Q8IZ73 545 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 MYOCDQ8IZQ8 938 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 SEPT8Q92599 483 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 GBP3Q9H0R5 595 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ZHX3Q9H4I2 956 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 TMEM206Q9H813 350 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 TYW1Q9NV66 732 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 RMND1Q9NWS8 449 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 TMEM161AQ9NX61 479 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 HCSTQ9UBK5 93 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 PIN4Q9Y237 131 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 PCDHB2Q9Y5E7 798 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 NR2E3Q9Y5X4 410 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 C5orf42Q9H799 3197 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 COL4A4P53420 1690 aaPredicted RBP5.4□□□□□ -1.54
LMNB1-208ENST00000504788 SYCE3A1L190 88 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 HNRNPDLO14979 420 aaKnown RBP5.4□□□□□ -1.54
LMNB1-208ENST00000504788 CLIC2O15247 247 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 OGTO15294 1046 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 OFD1O75665 1012 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 ERLIN2O94905 339 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 SMC2O95347 1197 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 GJB5O95377 273 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 EOMESO95936 686 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 FGBP02675 491 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 ZNF18P17022 549 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 GATMP50440 423 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 MARSP56192 900 aaKnown RBP5.4□□□□□ -1.54
LMNB1-208ENST00000504788 ZNF445P59923 1031 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 POU5F1Q01860 360 aaKnown RBP5.4□□□□□ -1.54
LMNB1-208ENST00000504788 DSC1Q08554 894 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 IKBKEQ14164 716 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 MYBPC2Q14324 1141 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 NOLC1Q14978 699 aaKnown RBP eCLIP5.4□□□□□ -1.54
LMNB1-208ENST00000504788 SKOR2Q2VWA4 1001 aaPredicted RBP5.4□□□□□ -1.54
LMNB1-208ENST00000504788 C15orf39Q6ZRI6 1047 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 CBWD2Q8IUF1 395 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 MLKLQ8NB16 471 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 ZNF516Q92618 1163 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 LPPQ93052 612 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 P2RX5Q93086 422 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 EEF2KMTQ96G04 330 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 DHTKD1Q96HY7 919 aaPredicted RBP5.4□□□□□ -1.54
LMNB1-208ENST00000504788 FAM84AQ96KN4 292 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 MFSD14AQ96MC6 490 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 ZFP42Q96MM3 310 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 CASD1Q96PB1 797 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 PPP1R10Q96QC0 940 aaKnown RBP5.4□□□□□ -1.54
LMNB1-208ENST00000504788 ACCSQ96QU6 501 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 HSPBP1Q9NZL4 362 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 CNTN3Q9P232 1028 aa5.4□□□□□ -1.54
LMNB1-208ENST00000504788 VCANP13611 3396 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 LCHNA4D1U4 455 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 GRXCR1A8MXD5 290 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 N4BP3O15049 544 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 MAPK13O15264 365 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 CLDN3O15551 220 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 RECQL4O94761 1208 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 NPTXRO95502 500 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 NR3C1P04150 777 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 STAG3L1P0CL83 205 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 FGFR1P11362 822 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 KCNE1P15382 129 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 PTMSP20962 102 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 AKAP5P24588 427 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 ERCC5P28715 1186 aaPredicted RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 ACOT2P49753 483 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 RAB27AP51159 221 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 LRRC63Q05C16 580 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 TYRO3Q06418 890 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 SOX4Q06945 474 aaPredicted RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 ZNF568Q3ZCX4 644 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 CT47A1Q5JQC4 288 aaPredicted RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 CDKAL1Q5VV42 579 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 TWF2Q6IBS0 349 aaKnown RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 DPY19L2P1Q6NXN4 242 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms