RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 METTL7BQ6UX53 244 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 TRIM59Q8IWR1 403 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 TAS1R2Q8TE23 839 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 PLCD4Q9BRC7 762 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 CYP39A1Q9NYL5 469 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 TBK1Q9UHD2 729 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 EXTL3O43909 919 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 IFNAR2P48551 515 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 MXRA7P84157 204 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 BTNL9Q6UXG8 535 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 MMS22LQ6ZRQ5 1243 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 COPS5Q92905 334 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 FMO2Q99518 471 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 OLFML3Q9NRN5 406 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 EHD2Q9NZN4 543 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 AMACRQ9UHK6 382 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 HEY1Q9Y5J3 304 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 SCN11AQ9UI33 1791 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 ROBO3Q96MS0 1386 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 GUCY2CP25092 1073 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 ARL4AP40617 200 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 ORC1Q13415 861 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 CCDC60Q8IWA6 550 aaPredicted RBP15.04■□□□□ -0
TCOF1-207ENST00000504761 SREK1Q8WXA9 508 aaKnown RBP15.04■□□□□ -0
TCOF1-207ENST00000504761 PACSIN1Q9BY11 444 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 KLK14Q9P0G3 267 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 TADA3O75528 432 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 CYP3A4P08684 503 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 NPY5RQ15761 445 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 KDM3BQ7LBC6 1761 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 ADORA2AP29274 412 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 TMEM132DQ14C87 1099 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 NAB2Q15742 525 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 GJC2Q5T442 439 aaPredicted RBP15.03■□□□□ -0
TCOF1-207ENST00000504761 NYAP1Q6ZVC0 841 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 DNERQ8NFT8 737 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 C1orf54Q8WWF1 131 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 C17orf75Q9HAS0 396 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 FAM49BQ9NUQ9 324 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 ARHGAP20Q9P2F6 1191 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 NOC2LQ9Y3T9 749 aaKnown RBP15.03■□□□□ -0
TCOF1-207ENST00000504761 LRRC37A3O60309 1634 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 KLRG2A4D1S0 409 aaPredicted RBP15.03■□□□□ -0
TCOF1-207ENST00000504761 SPDYE16A6NNV3 312 aaPredicted RBP15.03■□□□□ -0
TCOF1-207ENST00000504761 ACSL3O95573 720 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 CALB1P05937 261 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 TREML2Q5T2D2 321 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 LRRC1Q9BTT6 524 aa15.03■□□□□ -0
TCOF1-207ENST00000504761 A0A1W2PQJ5 194 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 H3BRB1 525 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 RNF40O75150 1001 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 RTN2O75298 545 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 GRAP2O75791 330 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 HSPA6P17066 643 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 GCLCP48506 637 aaPredicted RBP15.02■□□□□ -0
TCOF1-207ENST00000504761 PPP1R2P3Q6NXS1 205 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 DNAJC19Q96DA6 116 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 MTMR12Q9C0I1 747 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 TUT1Q9H6E5 874 aaKnown RBP15.02■□□□□ -0
TCOF1-207ENST00000504761 PRMT7Q9NVM4 692 aaPredicted RBP15.02■□□□□ -0
TCOF1-207ENST00000504761 SSX2IPQ9Y2D8 614 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 CCDC188H7C350 402 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 INSRRP14616 1297 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 SAT1P21673 171 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 HOXD10P28358 340 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 MAN1A1P33908 653 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 EP400NLQ6ZTU2 488 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 CCDC13Q8IYE1 715 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 GTF3C2Q8WUA4 911 aaPredicted RBP15.02■□□□□ -0
TCOF1-207ENST00000504761 RNPC3Q96LT9 517 aaKnown RBP15.02■□□□□ -0
TCOF1-207ENST00000504761 IKZF4Q9H2S9 585 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 NAGPAQ9UK23 515 aa15.02■□□□□ -0
TCOF1-207ENST00000504761 A0A087WZ62 844 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 VSNL1P62760 191 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 BBS9Q3SYG4 887 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 SPOPLQ6IQ16 392 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 CC2D1AQ6P1N0 951 aaPredicted RBP15.02□□□□□ -0.01
TCOF1-207ENST00000504761 MICALL1Q8N3F8 863 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 ETNPPLQ8TBG4 499 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 DHX38Q92620 1227 aaKnown RBP15.02□□□□□ -0.01
TCOF1-207ENST00000504761 DNAJC7Q99615 494 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 FDXACB1Q9BRP7 624 aaPredicted RBP15.02□□□□□ -0.01
TCOF1-207ENST00000504761 ZCCHC17Q9NP64 241 aaKnown RBP15.02□□□□□ -0.01
TCOF1-207ENST00000504761 ERVK-9P63128 1117 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 LMNB2Q03252 620 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 SGSM1Q2NKQ1 1148 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 HP1BP3Q5SSJ5 553 aaPredicted RBP15.02□□□□□ -0.01
TCOF1-207ENST00000504761 TRIM7Q9C029 511 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 MED4Q9NPJ6 270 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 SETD4Q9NVD3 440 aa15.02□□□□□ -0.01
TCOF1-207ENST00000504761 ALS2Q96Q42 1657 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 SYNGAP1Q96PV0 1343 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 PIK3CDO00329 1044 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 KIAA0391O15091 583 aaKnown RBP15.01□□□□□ -0.01
TCOF1-207ENST00000504761 ASAP2O43150 1006 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 STX2P32856 288 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 USP50Q70EL3 339 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-207ENST00000504761 PDZD4Q76G19 769 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-207ENST00000504761 TEX2Q8IWB9 1127 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 NOA1Q8NC60 698 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms