RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 FAM228AQ86W67 206 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 DRC7Q8IY82 874 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 CCDC150Q8NCX0 1101 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 NLRP7Q8WX94 980 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 ZNF516Q92618 1163 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 ARMC5Q96C12 935 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 FAM213AQ9BRX8 229 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 MSTO1Q9BUK6 570 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 NAA15Q9BXJ9 866 aaKnown RBP11.31□□□□□ -0.6
TPM3-217ENST00000504663 TMEM117Q9H0C3 514 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 AGPAT5Q9NUQ2 364 aa11.31□□□□□ -0.6
TPM3-217ENST00000504663 DNM1LO00429 736 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 OGTO15294 1046 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 MCF2P10911 925 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 GNAT1P11488 350 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 ACTN1P12814 892 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 EIF4BP23588 611 aaKnown RBP11.3□□□□□ -0.6
TPM3-217ENST00000504663 CRYBB1P53674 252 aaPredicted RBP11.3□□□□□ -0.6
TPM3-217ENST00000504663 GSDMDP57764 484 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 PTK7Q13308 1070 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 ENOX2Q16206 610 aaKnown RBP11.3□□□□□ -0.6
TPM3-217ENST00000504663 SLC9C1Q4G0N8 1177 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 FAM26DQ5JW98 314 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 FKBP15Q5T1M5 1219 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 WDR59Q6PJI9 974 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 ZBTB33Q86T24 672 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 TMEM130Q8N3G9 435 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 NME8Q8N427 588 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 OLIG1Q8TAK6 271 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 SEMA4DQ92854 862 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 DEFB118Q96PH6 123 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 POP1Q99575 1024 aaKnown RBP11.3□□□□□ -0.6
TPM3-217ENST00000504663 DNAJC7Q99615 494 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 CRACR2AQ9BSW2 395 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 LSM14BQ9BX40 385 aaKnown RBP11.3□□□□□ -0.6
TPM3-217ENST00000504663 CELF4Q9BZC1 486 aaKnown RBP11.3□□□□□ -0.6
TPM3-217ENST00000504663 GCOM2Q9BZD3 368 aaPredicted RBP11.3□□□□□ -0.6
TPM3-217ENST00000504663 PLCB1Q9NQ66 1216 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 CAPN11Q9UMQ6 739 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 ZKSCAN5Q9Y2L8 839 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 COQ4Q9Y3A0 265 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 NOC2LQ9Y3T9 749 aaKnown RBP11.3□□□□□ -0.6
TPM3-217ENST00000504663 TRPV2Q9Y5S1 764 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 CDY2AQ9Y6F7 541 aa11.3□□□□□ -0.6
TPM3-217ENST00000504663 A0A0U1RQG5 324 aaPredicted RBP11.29□□□□□ -0.6
TPM3-217ENST00000504663 ZNF233A6NK53 670 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 GOLGA6L6A8MZA4 724 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 P4HA2O15460 535 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 CLDN3O15551 220 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 B4GALT4O60513 344 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 VNN1O95497 513 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 C4BPAP04003 597 aaKnown RBP11.29□□□□□ -0.6
TPM3-217ENST00000504663 HSPA1AP0DMV8 641 aaKnown RBP11.29□□□□□ -0.6
TPM3-217ENST00000504663 HSPA1BP0DMV9 641 aaKnown RBP11.29□□□□□ -0.6
TPM3-217ENST00000504663 GCLMP48507 274 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 CDC42EP1Q00587 391 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 MYL7Q01449 175 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 TRIM14Q14142 442 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 MBTPS1Q14703 1052 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 PTGISQ16647 500 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 ZNF568Q3ZCX4 644 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 TCERG1LQ5VWI1 586 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 FBXO46Q6PJ61 603 aaPredicted RBP11.29□□□□□ -0.6
TPM3-217ENST00000504663 TRIM65Q6PJ69 517 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 EFCAB13Q8IY85 973 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 CXorf38Q8TB03 319 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 EIF2AQ9BY44 585 aaKnown RBP11.29□□□□□ -0.6
TPM3-217ENST00000504663 GPR88Q9GZN0 384 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 CXCL16Q9H2A7 254 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 KIAA1586Q9HCI6 787 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 PDE11AQ9HCR9 933 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 ABHD10Q9NUJ1 306 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 RBAKQ9NYW8 714 aaPredicted RBP11.29□□□□□ -0.6
TPM3-217ENST00000504663 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.29□□□□□ -0.64e-18■■□□□ 12.5
TPM3-217ENST00000504663 FHOD1Q9Y613 1164 aa11.29□□□□□ -0.6
TPM3-217ENST00000504663 AKR1B15C9JRZ8 316 aaPredicted RBP11.28□□□□□ -0.6
TPM3-217ENST00000504663 ARVCFO00192 962 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 PES1O00541 588 aaKnown RBP11.28□□□□□ -0.6
TPM3-217ENST00000504663 LDHAP00338 332 aaKnown RBP11.28□□□□□ -0.6
TPM3-217ENST00000504663 PTMAP06454 111 aaKnown RBP11.28□□□□□ -0.6
TPM3-217ENST00000504663 TPM2P07951 284 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 CTSHP09668 335 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 HARSP12081 509 aaKnown RBP11.28□□□□□ -0.6
TPM3-217ENST00000504663 COL6A1P12109 1028 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 KRT13P13646 458 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 SFPQP23246 707 aaKnown RBP eCLIP11.28□□□□□ -0.6
TPM3-217ENST00000504663 HNRNPH3P31942 346 aaKnown RBP11.28□□□□□ -0.6
TPM3-217ENST00000504663 MXI1P50539 228 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 LBX1P52954 281 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 JAM2P57087 298 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 PCBP1Q15365 356 aaKnown RBP eCLIP11.28□□□□□ -0.6
TPM3-217ENST00000504663 MEA1Q16626 185 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 EXOC3L4Q17RC7 722 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 ZACNQ401N2 412 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 FAM47CQ5HY64 1035 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 FBXO47Q5MNV8 452 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 KLHDC7AQ5VTJ3 777 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 TDRD10Q5VZ19 366 aaKnown RBP11.28□□□□□ -0.6
TPM3-217ENST00000504663 LMBRD2Q68DH5 695 aaPredicted RBP11.28□□□□□ -0.6
TPM3-217ENST00000504663 PDXDC1Q6P996 788 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms