RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 KLHDC7AQ5VTJ3 777 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 LHX8Q68G74 356 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 TRIM65Q6PJ69 517 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 RUFY4Q6ZNE9 571 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 ENOSF1Q7L5Y1 443 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 NT5DC4Q86YG4 428 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 WDR49Q8IV35 697 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 CCDC170Q8IYT3 715 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 TXLNBQ8N3L3 684 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 USP38Q8NB14 1042 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 EHBP1Q8NDI1 1231 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 FBXL13Q8NEE6 735 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 KIAA1524Q8TCG1 905 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 CCDC127Q96BQ5 260 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 ZBTB10Q96DT7 871 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 ZBTB45Q96K62 511 aaPredicted RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 ZNF830Q96NB3 372 aaPredicted RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 SPAG5Q96R06 1193 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 CGRRF1Q99675 332 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 CRACR2AQ9BSW2 395 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 CCDC94Q9BW85 323 aaPredicted RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 CELF4Q9BZC1 486 aaKnown RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 TMEM117Q9H0C3 514 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 CDT1Q9H211 546 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 GANQ9H2C0 597 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 ASB7Q9H672 318 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 MINDY3Q9H8M7 445 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 RPF1Q9H9Y2 349 aaKnown RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 PLEKHA5Q9HAU0 1116 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 CPSF3Q9UKF6 684 aaKnown RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 PHF24Q9UPV7 400 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 NOD1Q9Y239 953 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 TRPV2Q9Y5S1 764 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 BZW2Q9Y6E2 419 aaKnown RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 SQORQ9Y6N5 450 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 EVPLQ92817 2033 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 SSU72P8A0A1W2PR75 194 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 GOLGA6L9A6NEM1 432 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 DNM1LO00429 736 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 GPR182O15218 404 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 B4GALT5O43286 388 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 ZSCAN12O43309 604 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 ZNF500O60304 480 aaPredicted RBP8.8□□□□□ -1
TOPBP1-202ENST00000503338 FAM189A1O60320 539 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 NOL4O94818 638 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 IPO7O95373 1038 aaKnown RBP8.8□□□□□ -1
TOPBP1-202ENST00000503338 TUBB4AP04350 444 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 DLATP10515 647 aaKnown RBP8.8□□□□□ -1
TOPBP1-202ENST00000503338 CYLC1P35663 651 aaPredicted RBP8.8□□□□□ -1
TOPBP1-202ENST00000503338 GCLMP48507 274 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 ACOT2P49753 483 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 KLK7P49862 253 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 POLR2FP61218 127 aaKnown RBP8.8□□□□□ -1
TOPBP1-202ENST00000503338 PPP3CAQ08209 521 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 PTGISQ16647 500 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 PTPN21Q16825 1174 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 DUOXA2Q1HG44 320 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 ZACNQ401N2 412 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 CBWD6Q4V339 395 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 EPC2Q52LR7 807 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 WDR44Q5JSH3 913 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 CBWD3Q5JTY5 395 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 CBWD5Q5RIA9 395 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 SFMBT2Q5VUG0 894 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 GDF6Q6KF10 455 aaPredicted RBP8.8□□□□□ -1
TOPBP1-202ENST00000503338 PDXDC1Q6P996 788 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 SLC27A1Q6PCB7 646 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 CRELD2Q6UXH1 353 aaPredicted RBP8.8□□□□□ -1
TOPBP1-202ENST00000503338 SV2AQ7L0J3 742 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 RRAGAQ7L523 313 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 CTU1Q7Z7A3 348 aaKnown RBP8.8□□□□□ -1
TOPBP1-202ENST00000503338 ZBTB33Q86T24 672 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 TMEM139Q8IV31 216 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 HACE1Q8IYU2 909 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 CCDC155Q8N6L0 562 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 BAP1Q92560 729 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 FAXDC2Q96IV6 333 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 ANKRD36BP1Q96IX9 119 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 OSMRQ99650 979 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 STK33Q9BYT3 514 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 IMPG2Q9BZV3 1241 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 INTS2Q9H0H0 1204 aaKnown RBP8.8□□□□□ -1
TOPBP1-202ENST00000503338 PDZD7Q9H5P4 517 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 PAK6Q9NQU5 681 aaPredicted RBP8.8□□□□□ -1
TOPBP1-202ENST00000503338 STARD7Q9NQZ5 370 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 CHST12Q9NRB3 414 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 AGPAT5Q9NUQ2 364 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 RAB20Q9NX57 234 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 AIPL1Q9NZN9 384 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 APEX2Q9UBZ4 518 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 GINS2Q9Y248 185 aa8.8□□□□□ -1
TOPBP1-202ENST00000503338 A0A1W2PQ45 241 aaPredicted RBP8.79□□□□□ -1
TOPBP1-202ENST00000503338 A0A1W2PQY0 241 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 ARVCFO00192 962 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 TNNC2P02585 160 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 EDN1P05305 212 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 IQCF3P0C7M6 154 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 TMEM191BP0C7N4 346 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 STAG3L1P0CL83 205 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms