RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 CDC25BP30305 580 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 VAMP7P51809 220 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 OSTNP61366 133 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 NFX1Q12986 1120 aaKnown RBP16.55■□□□□ 0.24
MBD4-204ENST00000503197 BFSP2Q13515 415 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 GPNMBQ14956 572 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 COL13A1Q5TAT6 717 aaPredicted RBP16.55■□□□□ 0.24
MBD4-204ENST00000503197 TCERG1LQ5VWI1 586 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 LRRC8DQ7L1W4 858 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 ANP32BQ92688 251 aaKnown RBP16.55■□□□□ 0.24
MBD4-204ENST00000503197 RBAKQ9NYW8 714 aaPredicted RBP16.55■□□□□ 0.24
MBD4-204ENST00000503197 GPR182O15218 404 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 NPTXRO95502 500 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 TPM3P06753 285 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 TPM2P07951 284 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 KRT13P13646 458 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 PPP2R3AQ06190 1150 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 PSMD6Q15008 389 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 ENOX2Q16206 610 aaKnown RBP16.55■□□□□ 0.24
MBD4-204ENST00000503197 VSTM4Q8IW00 320 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 USP38Q8NB14 1042 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 TMC2Q8TDI7 906 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 CCDC127Q96BQ5 260 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 POP1Q99575 1024 aaKnown RBP16.55■□□□□ 0.24
MBD4-204ENST00000503197 ADPGKQ9BRR6 497 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 TMX1Q9H3N1 280 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 ATP11BQ9Y2G3 1177 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 ANK1P16157 1881 aa16.55■□□□□ 0.24
MBD4-204ENST00000503197 TANC1Q9C0D5 1861 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 LRRIQ3A6PVS8 624 aaPredicted RBP16.54■□□□□ 0.24
MBD4-204ENST00000503197 AFPP02771 609 aaKnown RBP16.54■□□□□ 0.24
MBD4-204ENST00000503197 STAG3L1P0CL83 205 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 PPP3CAQ08209 521 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 PAK2Q13177 524 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 DCAF4L1Q3SXM0 396 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.54■□□□□ 0.24
MBD4-204ENST00000503197 BRSK2Q8IWQ3 736 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 PDE11AQ9HCR9 933 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 TBX21Q9UL17 535 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 CLDN10P78369 228 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 ENPEPQ07075 957 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 CBWD6Q4V339 395 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 CBWD3Q5JTY5 395 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 CBWD5Q5RIA9 395 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 CCDC51Q96ER9 411 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 FAM84AQ96KN4 292 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 PPP1R9BQ96SB3 815 aa16.54■□□□□ 0.24
MBD4-204ENST00000503197 TOPORSQ9NS56 1045 aaPredicted RBP16.54■□□□□ 0.24
MBD4-204ENST00000503197 PTPRJQ12913 1337 aa16.53■□□□□ 0.24
MBD4-204ENST00000503197 MGEA5O60502 916 aa16.53■□□□□ 0.24
MBD4-204ENST00000503197 NBNO60934 754 aa16.53■□□□□ 0.24
MBD4-204ENST00000503197 CLTAP09496 248 aa16.53■□□□□ 0.24
MBD4-204ENST00000503197 CXCL8P10145 99 aa16.53■□□□□ 0.24
MBD4-204ENST00000503197 GRM5P41594 1212 aa16.53■□□□□ 0.24
MBD4-204ENST00000503197 HSP90AA2PQ14568 343 aaPredicted RBP16.53■□□□□ 0.24
MBD4-204ENST00000503197 ERGIC2Q96RQ1 377 aa16.53■□□□□ 0.24
MBD4-204ENST00000503197 HIPK3Q9H422 1215 aa16.53■□□□□ 0.24
MBD4-204ENST00000503197 NXF3Q9H4D5 531 aaKnown RBP16.53■□□□□ 0.24
MBD4-204ENST00000503197 CHST12Q9NRB3 414 aa16.53■□□□□ 0.24
MBD4-204ENST00000503197 HES2Q9Y543 173 aa16.53■□□□□ 0.24
MBD4-204ENST00000503197 A0A1W2PQC6 194 aa16.52■□□□□ 0.24
MBD4-204ENST00000503197 DLATP10515 647 aaKnown RBP16.52■□□□□ 0.24
MBD4-204ENST00000503197 FMO5P49326 533 aa16.52■□□□□ 0.24
MBD4-204ENST00000503197 KCNMA1Q12791 1236 aa16.52■□□□□ 0.24
MBD4-204ENST00000503197 DSC3Q14574 896 aa16.52■□□□□ 0.24
MBD4-204ENST00000503197 TWF2Q6IBS0 349 aaKnown RBP16.52■□□□□ 0.24
MBD4-204ENST00000503197 SPC24Q8NBT2 197 aa16.52■□□□□ 0.24
MBD4-204ENST00000503197 ZNF516Q92618 1163 aa16.52■□□□□ 0.24
MBD4-204ENST00000503197 WNT8AQ9H1J5 351 aa16.52■□□□□ 0.24
MBD4-204ENST00000503197 MMRN2Q9H8L6 949 aa16.52■□□□□ 0.24
MBD4-204ENST00000503197 SIK3Q9Y2K2 1263 aa16.52■□□□□ 0.24
MBD4-204ENST00000503197 GCLMP48507 274 aa16.52■□□□□ 0.23
MBD4-204ENST00000503197 KLK7P49862 253 aa16.52■□□□□ 0.23
MBD4-204ENST00000503197 CCDC173Q0VFZ6 552 aa16.52■□□□□ 0.23
MBD4-204ENST00000503197 SYCP1Q15431 976 aa16.52■□□□□ 0.23
MBD4-204ENST00000503197 SLC10A6Q3KNW5 377 aa16.52■□□□□ 0.23
MBD4-204ENST00000503197 FKBP15Q5T1M5 1219 aa16.52■□□□□ 0.23
MBD4-204ENST00000503197 SMG8Q8ND04 991 aaKnown RBP16.52■□□□□ 0.23
MBD4-204ENST00000503197 SNTG2Q9NY99 539 aa16.52■□□□□ 0.23
MBD4-204ENST00000503197 SCN5AQ14524 2016 aa16.52■□□□□ 0.23
MBD4-204ENST00000503197 POU5F1Q01860 360 aaKnown RBP16.51■□□□□ 0.23
MBD4-204ENST00000503197 KYAT1Q16773 422 aa16.51■□□□□ 0.23
MBD4-204ENST00000503197 LMBRD2Q68DH5 695 aaPredicted RBP16.51■□□□□ 0.23
MBD4-204ENST00000503197 SPECC1LQ69YQ0 1117 aa16.51■□□□□ 0.23
MBD4-204ENST00000503197 TMC6Q7Z403 805 aa16.51■□□□□ 0.23
MBD4-204ENST00000503197 APBB1IPQ7Z5R6 666 aaPredicted RBP16.51■□□□□ 0.23
MBD4-204ENST00000503197 ACAP3Q96P50 834 aa16.51■□□□□ 0.23
MBD4-204ENST00000503197 CRACR2AQ9BSW2 395 aa16.51■□□□□ 0.23
MBD4-204ENST00000503197 IFIH1Q9BYX4 1025 aaKnown RBP16.51■□□□□ 0.23
MBD4-204ENST00000503197 PPP1R12CQ9BZL4 782 aa16.51■□□□□ 0.23
MBD4-204ENST00000503197 TRIM6Q9C030 488 aaPredicted RBP16.51■□□□□ 0.23
MBD4-204ENST00000503197 TMEM117Q9H0C3 514 aa16.51■□□□□ 0.23
MBD4-204ENST00000503197 CXCL16Q9H2A7 254 aa16.51■□□□□ 0.23
MBD4-204ENST00000503197 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
MBD4-204ENST00000503197 RPF1Q9H9Y2 349 aaKnown RBP16.51■□□□□ 0.23
MBD4-204ENST00000503197 IPPQ9Y573 584 aa16.51■□□□□ 0.23
MBD4-204ENST00000503197 TTC26A0AVF1 554 aa16.5■□□□□ 0.23
MBD4-204ENST00000503197 CITO14578 2027 aa16.5■□□□□ 0.23
MBD4-204ENST00000503197 CLTBP09497 229 aa16.5■□□□□ 0.23
MBD4-204ENST00000503197 CYP2C18P33260 490 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms