RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 BRDTQ58F21 947 aaPredicted RBP12.49□□□□□ -0.41
USP46-204ENST00000503060 NT5DC4Q86YG4 428 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 GLYCTKQ8IVS8 523 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 SPATA4Q8NEY3 305 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 TMC2Q8TDI7 906 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 PARD3BQ8TEW8 1205 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 POMGNT1Q8WZA1 660 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 L3MBTL3Q96JM7 780 aaPredicted RBP12.49□□□□□ -0.41
USP46-204ENST00000503060 MFSD14AQ96MC6 490 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 R3HDMLQ9H3Y0 253 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 CHCHD3Q9NX63 227 aaKnown RBP12.49□□□□□ -0.41
USP46-204ENST00000503060 A0A0A6YYK5 440 aaPredicted RBP12.48□□□□□ -0.41
USP46-204ENST00000503060 LRRIQ3A6PVS8 624 aaPredicted RBP12.48□□□□□ -0.41
USP46-204ENST00000503060 FARP2O94887 1054 aaPredicted RBP12.48□□□□□ -0.41
USP46-204ENST00000503060 GARTP22102 1010 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 PAFAH1B1P43034 410 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 TRPC1P48995 793 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 NEDD9Q14511 834 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 CCDC127Q96BQ5 260 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 PCYT2Q99447 389 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 NIFKQ9BYG3 293 aaKnown RBP12.48□□□□□ -0.41
USP46-204ENST00000503060 DHX33Q9H6R0 707 aaKnown RBP12.48□□□□□ -0.41
USP46-204ENST00000503060 SMARCAL1Q9NZC9 954 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 EHD2Q9NZN4 543 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 RNF14Q9UBS8 474 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 HNRNPDLO14979 420 aaKnown RBP12.48□□□□□ -0.41
USP46-204ENST00000503060 TNFAIP3P21580 790 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 MCM3P25205 808 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 EPHX2P34913 555 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 GALCP54803 685 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 CYP24A1Q07973 514 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 MOGSQ13724 837 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 KRT39Q6A163 491 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 GPD1LQ8N335 351 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 LRRC57Q8N9N7 239 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 TPCN2Q8NHX9 752 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 TMEM143Q96AN5 459 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 BICD1Q96G01 975 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 PORCNQ9H237 461 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 TMEM8AQ9HCN3 771 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
USP46-204ENST00000503060 CFAP221Q4G0U5 840 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 ASAP3Q8TDY4 903 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 KCNN1Q92952 543 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 OPTNQ96CV9 577 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 CEP89Q96ST8 783 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 AGPAT1Q99943 283 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 SPC25Q9HBM1 224 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 RBPJLQ9UBG7 517 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 L1RE1Q9UN81 338 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 COQ4Q9Y3A0 265 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 LRRC37A2A6NM11 1700 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 NCANO14594 1321 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 MAP2K7O14733 419 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 TMEM253P0C7T8 217 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 GLRA2P23416 452 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 GTF2H1P32780 548 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 ARL2P36404 184 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 DNA2P51530 1060 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 ENPEPQ07075 957 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 FAM160B1Q5W0V3 765 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 SDE2Q6IQ49 451 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 USP37Q86T82 979 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 IQCF2Q8IXL9 164 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 SEMA4DQ92854 862 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 KAT5Q92993 513 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 ZBTB9Q96C00 473 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 MS4A14Q96JA4 679 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 POP1Q99575 1024 aaKnown RBP12.47□□□□□ -0.41
USP46-204ENST00000503060 TOPORSQ9NS56 1045 aaPredicted RBP12.47□□□□□ -0.41
USP46-204ENST00000503060 NRBP2Q9NSY0 501 aa12.47□□□□□ -0.41
USP46-204ENST00000503060 PACSIN2Q9UNF0 486 aaPredicted RBP12.47□□□□□ -0.41
USP46-204ENST00000503060 TMCO5BA8MYB1 307 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 GGPS1O95749 300 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 OSBPP22059 807 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 RFC5P40937 340 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 LIG4P49917 911 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 GPC3P51654 580 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 RPS6KA1Q15418 735 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 TARBP2Q15633 366 aaKnown RBP12.46□□□□□ -0.41
USP46-204ENST00000503060 C11orf91Q3C1V1 193 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 Q3C1V9 767 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 METTL7BQ6UX53 244 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 FASTKD5Q7L8L6 764 aaKnown RBP12.46□□□□□ -0.41
USP46-204ENST00000503060 HDXQ7Z353 690 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 SLC20A1Q8WUM9 679 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 LMBR1Q8WVP7 490 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 SLC7A3Q8WY07 619 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 TAF4BQ92750 862 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 FGD4Q96M96 766 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 KREMEN1Q96MU8 473 aa12.46□□□□□ -0.41
USP46-204ENST00000503060 MPHOSPH6Q99547 160 aaKnown RBP12.46□□□□□ -0.41
USP46-204ENST00000503060 SOCS7O14512 581 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 PGK2P07205 417 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 NAMPTP43490 491 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 STAT5BP51692 787 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 STRN3Q13033 797 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 KCTD2Q14681 263 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 GPAT2Q6NUI2 795 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms