RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 HERC2P3Q9BVR0 1158 aa11.88□□□□□ -0.51
SNCA-207ENST00000502987 NXF3Q9H4D5 531 aaKnown RBP11.88□□□□□ -0.51
SNCA-207ENST00000502987 TUFT1Q9NNX1 390 aa11.88□□□□□ -0.51
SNCA-207ENST00000502987 GPRC5CQ9NQ84 441 aa11.88□□□□□ -0.51
SNCA-207ENST00000502987 MAN1C1Q9NR34 630 aa11.88□□□□□ -0.51
SNCA-207ENST00000502987 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
SNCA-207ENST00000502987 USTQ9Y2C2 406 aa11.88□□□□□ -0.51
SNCA-207ENST00000502987 C2orf16Q68DN1 1984 aa11.88□□□□□ -0.51
SNCA-207ENST00000502987 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
SNCA-207ENST00000502987 PLXNA3P51805 1871 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 KMT2EQ8IZD2 1858 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 CCDC195A0A1B0GUA6 201 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 ARHGEF35A5YM69 484 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 TEX28O15482 410 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 TADA2AO75478 443 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 GLUD1P00367 558 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 CATSPER3Q86XQ3 398 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 RABGGTAQ92696 567 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 ATOH1Q92858 354 aaPredicted RBP11.87□□□□□ -0.51
SNCA-207ENST00000502987 SMOC2Q9H3U7 446 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 PIDD1Q9HB75 910 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 PRMT7Q9NVM4 692 aaPredicted RBP11.87□□□□□ -0.51
SNCA-207ENST00000502987 ZDBF2Q9HCK1 2354 aa11.87□□□□□ -0.51
SNCA-207ENST00000502987 MTCL1Q9Y4B5 1905 aaKnown RBP11.86□□□□□ -0.51
SNCA-207ENST00000502987 A0A1B0GUA9 196 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 F8W810 466 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 LILRB3O75022 631 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 MED24O75448 989 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 OR52Z1P0C646 297 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 GBP2P32456 591 aaPredicted RBP11.86□□□□□ -0.51
SNCA-207ENST00000502987 AMHR2Q16671 573 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 USP41Q3LFD5 358 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 ERICH6BQ5W0A0 696 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 PADI6Q6TGC4 694 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 DEPTORQ8TB45 409 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 B3GALT6Q96L58 329 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 PHOX2BQ99453 314 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 ADPGKQ9BRR6 497 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 NFKBIZQ9BYH8 718 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 IRF2BPLQ9H1B7 796 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 C2orf40Q9H1Z8 148 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 FAM86C1Q9NVL1 165 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 MARCH5Q9NX47 278 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 FBXL21Q9UKT6 434 aa11.86□□□□□ -0.51
SNCA-207ENST00000502987 NOL7Q9UMY1 257 aaKnown RBP11.86□□□□□ -0.51
SNCA-207ENST00000502987 H0Y858 1186 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 N4BP3O15049 544 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 INPPL1O15357 1258 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 CCT6AP40227 531 aaKnown RBP11.85□□□□□ -0.51
SNCA-207ENST00000502987 RBM25P49756 843 aaKnown RBP11.85□□□□□ -0.51
SNCA-207ENST00000502987 DSC1Q08554 894 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 GRIK3Q13003 919 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 PRPF4BQ13523 1007 aaKnown RBP11.85□□□□□ -0.51
SNCA-207ENST00000502987 MAPK6Q16659 721 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 TTC38Q5R3I4 469 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 KIAA0319Q5VV43 1072 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 FUT10Q6P4F1 479 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 C15orf39Q6ZRI6 1047 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 CEP57Q86XR8 500 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 FLCNQ8NFG4 579 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 FEZF2Q8TBJ5 459 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 RIN2Q8WYP3 895 aaPredicted RBP11.85□□□□□ -0.51
SNCA-207ENST00000502987 STAMQ92783 540 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 IFT74Q96LB3 600 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 PRIMPOLQ96LW4 560 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 ZSCAN31Q96LW9 406 aaPredicted RBP11.85□□□□□ -0.51
SNCA-207ENST00000502987 POLR3CQ9BUI4 534 aaPredicted RBP11.85□□□□□ -0.51
SNCA-207ENST00000502987 GPR62Q9BZJ7 368 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 FOXP1Q9H334 677 aaPredicted RBP11.85□□□□□ -0.51
SNCA-207ENST00000502987 POLD4Q9HCU8 107 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 SNTG2Q9NY99 539 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 ADAM28Q9UKQ2 775 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 DENND4AQ7Z401 1863 aa11.85□□□□□ -0.51
SNCA-207ENST00000502987 CASTOR2A6NHX0 329 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 RFPL2O75678 378 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 PRKCBP05771 671 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 THP07101 528 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 RPL17P18621 184 aaKnown RBP11.84□□□□□ -0.51
SNCA-207ENST00000502987 RFX1P22670 979 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 RPA1P27694 616 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 HMGN5P82970 282 aaKnown RBP11.84□□□□□ -0.51
SNCA-207ENST00000502987 DSG1Q02413 1049 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 TCF15Q12870 199 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 TDGQ13569 410 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 HSP90AA2PQ14568 343 aaPredicted RBP11.84□□□□□ -0.51
SNCA-207ENST00000502987 PPP2R5AQ15172 486 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 HAUS3Q68CZ6 603 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 NOSTRINQ8IVI9 506 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 HASPINQ8TF76 798 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 SMG7Q92540 1137 aaKnown RBP11.84□□□□□ -0.51
SNCA-207ENST00000502987 LLPHQ9BRT6 129 aaKnown RBP11.84□□□□□ -0.51
SNCA-207ENST00000502987 RXFP1Q9HBX9 757 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNCA-207ENST00000502987 CACNG4Q9UBN1 327 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 LRWD1Q9UFC0 647 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 USP20Q9Y2K6 914 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 GDAQ9Y2T3 454 aa11.84□□□□□ -0.51
SNCA-207ENST00000502987 TK2O00142 265 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms