RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CTTNQ14247 550 aaKnown RBP6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 HSP90AA2PQ14568 343 aaPredicted RBP6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 PPP2R5AQ15172 486 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 ANGPT1Q15389 498 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 CALCRLQ16602 461 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 LONRF3Q496Y0 759 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 EARS2Q5JPH6 523 aaKnown RBP6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 KANK3Q6NY19 840 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 MAMSTRQ6ZN01 415 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 MTSS1LQ765P7 747 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 TAS1R1Q7RTX1 841 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 LNX1Q8TBB1 728 aaPredicted RBP6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 ASAP3Q8TDY4 903 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 SMG7Q92540 1137 aaKnown RBP6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 KCNN1Q92952 543 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 SHDQ96IW2 340 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 TTPALQ9BTX7 342 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 GPR62Q9BZJ7 368 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 CCDC113Q9H0I3 377 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 SMOC2Q9H3U7 446 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 NXF3Q9H4D5 531 aaKnown RBP6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 FAM86C1Q9NVL1 165 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 DLGAP2Q9P1A6 1054 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 ORC3Q9UBD5 711 aaPredicted RBP6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 KCNH3Q9ULD8 1083 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 MAFFQ9ULX9 164 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 PRG3Q9Y2Y8 225 aaPredicted RBP6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 CITO14578 2027 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 DCHS1Q96JQ0 3298 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 KRBA1A5PL33 1030 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 C2CD2LO14523 706 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 PI15O43692 258 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 TADA2AO75478 443 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 RFPL2O75678 378 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 THP07101 528 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 CYP11B2P19099 503 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 FGFR3P22607 806 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 GBP2P32456 591 aaPredicted RBP6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 NAMPTP43490 491 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 TRAPPC10P48553 1259 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 EFNA5P52803 228 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 PFKPQ01813 784 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 RAB33AQ14088 237 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 PDIA5Q14554 519 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 MAPK6Q16659 721 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 ME3Q16798 604 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 DCAF4L1Q3SXM0 396 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 XKR4Q5GH76 650 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 RTP2Q5QGT7 225 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 ZC3H14Q6PJT7 736 aaKnown RBP6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 APBB1IPQ7Z5R6 666 aaPredicted RBP6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 CATSPER3Q86XQ3 398 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 ZBTB8OSQ8IWT0 167 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 DIS3L2Q8IYB7 885 aaKnown RBP6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 SIX5Q8N196 739 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 NSUN7Q8NE18 718 aaKnown RBP6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 ERMNQ8TAM6 284 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 CPB2Q96IY4 423 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 CCDC43Q96MW1 224 aaKnown RBP6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 UROC1Q96N76 676 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 MYADMQ96S97 322 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 NELL2Q99435 816 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 CLSTN3Q9BQT9 956 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 ADPGKQ9BRR6 497 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 LLPHQ9BRT6 129 aaKnown RBP6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 FOXP1Q9H334 677 aaPredicted RBP6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 ARHGEF3Q9NR81 526 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 KCNG1Q9UIX4 513 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 FBXO4Q9UKT5 387 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 FBXL21Q9UKT6 434 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 CDH7Q9ULB5 785 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 HES2Q9Y543 173 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 BACE2Q9Y5Z0 518 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 DOCK6Q96HP0 2047 aa6.75□□□□□ -1.33
LSM3P4-201ENST00000502948 BTBD18B2RXH4 712 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 PTGESO14684 152 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 B4GALT5O43286 388 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 TRAPPC3O43617 180 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 NARSO43776 548 aaKnown RBP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 XYLBO75191 536 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 NPTXRO95502 500 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 LMNAP02545 664 aaKnown RBP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 AKAP5P24588 427 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 TXKP42681 527 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 FXR2P51116 673 aaKnown RBP eCLIP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 MLLT6P55198 1093 aaPredicted RBP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 PRPF4BQ13523 1007 aaKnown RBP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 TRIM29Q14134 588 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 HAUS3Q68CZ6 603 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 DCLRE1AQ6PJP8 1040 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 POTEGQ6S5H5 508 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 FRMD5Q7Z6J6 570 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 C1orf210Q8IVY1 113 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 GPR161Q8N6U8 529 aaKnown RBP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 FLCNQ8NFG4 579 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 FEZF2Q8TBJ5 459 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 RIN2Q8WYP3 895 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms