RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 RAD54LQ92698 747 aa27.25■■□□□ 1.95
TRIO-204ENST00000502816 KHSRPQ92945 711 aaKnown RBP eCLIP27.25■■□□□ 1.953e-6■■■■□ 22
TRIO-204ENST00000502816 RPS6KC1Q96S38 1066 aa27.25■■□□□ 1.95
TRIO-204ENST00000502816 POP1Q99575 1024 aaKnown RBP27.25■■□□□ 1.95
TRIO-204ENST00000502816 CHST7Q9NS84 486 aa27.25■■□□□ 1.95
TRIO-204ENST00000502816 FOXD4L1Q9NU39 408 aa27.25■■□□□ 1.95
TRIO-204ENST00000502816 LARSQ9P2J5 1176 aaKnown RBP27.25■■□□□ 1.95
TRIO-204ENST00000502816 SSX2IPQ9Y2D8 614 aa27.25■■□□□ 1.95
TRIO-204ENST00000502816 PRG3Q9Y2Y8 225 aaPredicted RBP27.25■■□□□ 1.95
TRIO-204ENST00000502816 USP15Q9Y4E8 981 aaPredicted RBP27.25■■□□□ 1.95
TRIO-204ENST00000502816 PI4K2BG5E9Z4 385 aa27.24■■□□□ 1.95
TRIO-204ENST00000502816 SLC16A4O15374 487 aa27.24■■□□□ 1.95
TRIO-204ENST00000502816 THP07101 528 aa27.24■■□□□ 1.95
TRIO-204ENST00000502816 MAPTP10636 758 aaKnown RBP27.24■■□□□ 1.95
TRIO-204ENST00000502816 SCP2P22307 547 aa27.24■■□□□ 1.95
TRIO-204ENST00000502816 DDIT3P35638 169 aa27.24■■□□□ 1.95
TRIO-204ENST00000502816 NCKAP1LP55160 1127 aa27.24■■□□□ 1.95
TRIO-204ENST00000502816 RAD51AP2Q09MP3 1159 aa27.24■■□□□ 1.95
TRIO-204ENST00000502816 SLC39A14Q15043 492 aa27.24■■□□□ 1.95
TRIO-204ENST00000502816 KARSQ15046 597 aaKnown RBP27.24■■□□□ 1.95
TRIO-204ENST00000502816 XKR4Q5GH76 650 aa27.24■■□□□ 1.95
TRIO-204ENST00000502816 KIAA0319Q5VV43 1072 aa27.24■■□□□ 1.95
TRIO-204ENST00000502816 MARCKSP29966 332 aaPredicted RBP27.23■■□□□ 1.95
TRIO-204ENST00000502816 GRM5P41594 1212 aa27.23■■□□□ 1.95
TRIO-204ENST00000502816 NASPP49321 788 aaPredicted RBP27.23■■□□□ 1.95
TRIO-204ENST00000502816 ALKAL1Q6UXT8 129 aa27.23■■□□□ 1.95
TRIO-204ENST00000502816 USP49Q70CQ1 688 aa27.23■■□□□ 1.95
TRIO-204ENST00000502816 TAS1R1Q7RTX1 841 aa27.23■■□□□ 1.95
TRIO-204ENST00000502816 PPFIBP1Q86W92 1011 aa27.23■■□□□ 1.95
TRIO-204ENST00000502816 EPSTI1Q96J88 318 aa27.23■■□□□ 1.95
TRIO-204ENST00000502816 KLHL5Q96PQ7 755 aa27.23■■□□□ 1.95
TRIO-204ENST00000502816 USP28Q96RU2 1077 aa27.23■■□□□ 1.95
TRIO-204ENST00000502816 TARS2Q9BW92 718 aaKnown RBP27.23■■□□□ 1.95
TRIO-204ENST00000502816 CDT1Q9H211 546 aa27.23■■□□□ 1.95
TRIO-204ENST00000502816 CXCL16Q9H2A7 254 aa27.23■■□□□ 1.95
TRIO-204ENST00000502816 MRPL17Q9NRX2 175 aaKnown RBP27.23■■□□□ 1.95
TRIO-204ENST00000502816 NPHP3-ACAD11A0A0J9YXS1 232 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 H0YCG3 227 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 C1RP00736 705 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 MCF2P10911 925 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 DSG1Q02413 1049 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 LLGL2Q6P1M3 1020 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 GPBP1Q86WP2 473 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 HSCBQ8IWL3 235 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 LARP4BQ92615 738 aaKnown RBP27.22■■□□□ 1.95
TRIO-204ENST00000502816 REEP2Q9BRK0 252 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 EMILIN2Q9BXX0 1053 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 RXFP1Q9HBX9 757 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 ADAM28Q9UKQ2 775 aa27.22■■□□□ 1.95
TRIO-204ENST00000502816 F8W810 466 aa27.21■■□□□ 1.95
TRIO-204ENST00000502816 CNPP09543 421 aaKnown RBP27.21■■□□□ 1.95
TRIO-204ENST00000502816 ITIH3Q06033 890 aa27.21■■□□□ 1.95
TRIO-204ENST00000502816 MCM6Q14566 821 aa27.21■■□□□ 1.95
TRIO-204ENST00000502816 CBX2Q14781 532 aaPredicted RBP27.21■■□□□ 1.95
TRIO-204ENST00000502816 TPRNQ4KMQ1 711 aa27.21■■□□□ 1.95
TRIO-204ENST00000502816 MPZL3Q6UWV2 235 aa27.21■■□□□ 1.95
TRIO-204ENST00000502816 ZPBP2Q6X784 338 aa27.21■■□□□ 1.95
TRIO-204ENST00000502816 PPP1R10Q96QC0 940 aaKnown RBP27.21■■□□□ 1.95
TRIO-204ENST00000502816 PHF7Q9BWX1 381 aaPredicted RBP27.21■■□□□ 1.95
TRIO-204ENST00000502816 DZANK1Q9NVP4 752 aa27.21■■□□□ 1.95
TRIO-204ENST00000502816 GDAQ9Y2T3 454 aa27.21■■□□□ 1.95
TRIO-204ENST00000502816 LOC730098B7Z3J9 87 aa27.2■■□□□ 1.94
TRIO-204ENST00000502816 CITO14578 2027 aa27.2■■□□□ 1.94
TRIO-204ENST00000502816 TOM1L1O75674 476 aa27.2■■□□□ 1.94
TRIO-204ENST00000502816 SSTR3P32745 418 aaPredicted RBP27.2■■□□□ 1.94
TRIO-204ENST00000502816 CLCN4P51793 760 aa27.2■■□□□ 1.94
TRIO-204ENST00000502816 HSP90AA2PQ14568 343 aaPredicted RBP27.2■■□□□ 1.94
TRIO-204ENST00000502816 FUT10Q6P4F1 479 aa27.2■■□□□ 1.94
TRIO-204ENST00000502816 C1QTNF1Q9BXJ1 281 aa27.2■■□□□ 1.94
TRIO-204ENST00000502816 GPR62Q9BZJ7 368 aa27.2■■□□□ 1.94
TRIO-204ENST00000502816 ADAM7Q9H2U9 754 aa27.2■■□□□ 1.94
TRIO-204ENST00000502816 EPHX3Q9H6B9 360 aa27.2■■□□□ 1.94
TRIO-204ENST00000502816 STK17AQ9UEE5 414 aa27.2■■□□□ 1.94
TRIO-204ENST00000502816 URODP06132 367 aa27.19■■□□□ 1.94
TRIO-204ENST00000502816 GLUD2P49448 558 aa27.19■■□□□ 1.94
TRIO-204ENST00000502816 STRN3Q13033 797 aa27.19■■□□□ 1.94
TRIO-204ENST00000502816 ZNF568Q3ZCX4 644 aa27.19■■□□□ 1.94
TRIO-204ENST00000502816 SPECC1Q5M775 1068 aa27.19■■□□□ 1.94
TRIO-204ENST00000502816 HAUS6Q7Z4H7 955 aa27.19■■□□□ 1.94
TRIO-204ENST00000502816 CEP120Q8N960 986 aa27.19■■□□□ 1.94
TRIO-204ENST00000502816 CLIC6Q96NY7 704 aa27.19■■□□□ 1.94
TRIO-204ENST00000502816 PAAF1Q9BRP4 392 aa27.19■■□□□ 1.94
TRIO-204ENST00000502816 CCDC39Q9UFE4 941 aa27.19■■□□□ 1.94
TRIO-204ENST00000502816 TMEM189-UBE2V1I3L0A0 370 aa27.18■■□□□ 1.94
TRIO-204ENST00000502816 EPCAMP16422 314 aa27.18■■□□□ 1.94
TRIO-204ENST00000502816 CA8P35219 290 aa27.18■■□□□ 1.94
TRIO-204ENST00000502816 CACNB1Q02641 598 aaPredicted RBP27.18■■□□□ 1.94
TRIO-204ENST00000502816 CEBPZQ03701 1054 aaKnown RBP27.18■■□□□ 1.94
TRIO-204ENST00000502816 USP41Q3LFD5 358 aa27.18■■□□□ 1.94
TRIO-204ENST00000502816 TMEM87AQ8NBN3 555 aa27.18■■□□□ 1.94
TRIO-204ENST00000502816 LINC00301Q8NCQ3 95 aa27.18■■□□□ 1.94
TRIO-204ENST00000502816 FIZ1Q96SL8 496 aa27.18■■□□□ 1.94
TRIO-204ENST00000502816 CCDC94Q9BW85 323 aaPredicted RBP27.18■■□□□ 1.94
TRIO-204ENST00000502816 PARVGQ9HBI0 331 aa27.18■■□□□ 1.94
TRIO-204ENST00000502816 TOPORSQ9NS56 1045 aaPredicted RBP27.18■■□□□ 1.94
TRIO-204ENST00000502816 SMIM28A0A1B0GU29 152 aa27.17■■□□□ 1.94
TRIO-204ENST00000502816 TADA2AO75478 443 aa27.17■■□□□ 1.94
TRIO-204ENST00000502816 MCL1Q07820 350 aa27.17■■□□□ 1.94
TRIO-204ENST00000502816 KRI1Q8N9T8 703 aaKnown RBP27.17■■□□□ 1.94
TRIO-204ENST00000502816 RASSF8Q8NHQ8 419 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms