RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 ACP6Q9NPH0 428 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 TOPORSQ9NS56 1045 aaPredicted RBP17.81■□□□□ 0.44
VCAN-204ENST00000502527 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 NDUFAB1O14561 156 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 HNRNPDLO14979 420 aaKnown RBP17.8■□□□□ 0.44
VCAN-204ENST00000502527 CTNNA2P26232 953 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 COPB2P35606 906 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 GUCY1A3Q02108 690 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 AGBL2Q5U5Z8 902 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 SV2AQ7L0J3 742 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 GLG1Q92896 1179 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 CD101Q93033 1021 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 ZNF653Q96CK0 615 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 FAM81BQ96LP2 452 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 EPN3Q9H201 632 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 PDLIM7Q9NR12 457 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 ZNF112Q9UJU3 913 aa17.8■□□□□ 0.44
VCAN-204ENST00000502527 MYO1FO00160 1098 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 TRIM66O15016 1216 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 ATMINO43313 823 aaPredicted RBP17.79■□□□□ 0.44
VCAN-204ENST00000502527 SPOPO43791 374 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 ZC3H11AO75152 810 aaKnown RBP eCLIP17.79■□□□□ 0.44
VCAN-204ENST00000502527 STAM2O75886 525 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 DLATP10515 647 aaKnown RBP17.79■□□□□ 0.44
VCAN-204ENST00000502527 PTPRAP18433 802 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 GBP1P32455 592 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 DSG3P32926 999 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 MARCKSL1P49006 195 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 GMPSP49915 693 aaPredicted RBP17.79■□□□□ 0.44
VCAN-204ENST00000502527 SOX10P56693 466 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 MAGOHBQ96A72 148 aaKnown RBP17.79■□□□□ 0.44
VCAN-204ENST00000502527 BICD1Q96G01 975 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 ATP6V0A4Q9HBG4 840 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 ZDHHC18Q9NUE0 388 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 SLC9A2Q9UBY0 812 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 CHORDC1Q9UHD1 332 aaPredicted RBP17.79■□□□□ 0.44
VCAN-204ENST00000502527 SEPT9Q9UHD8 586 aaPredicted RBP17.79■□□□□ 0.44
VCAN-204ENST00000502527 PCYOX1Q9UHG3 505 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 KCNG1Q9UIX4 513 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 ADAMTS5Q9UNA0 930 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 SRRM3A6NNA2 597 aaPredicted RBP17.79■□□□□ 0.44
VCAN-204ENST00000502527 PODXLO00592 558 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 EIF3BP55884 814 aaKnown RBP17.79■□□□□ 0.44
VCAN-204ENST00000502527 GCNT1Q02742 428 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 ACAD10Q6JQN1 1059 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 AADACL2Q6P093 401 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 PRELID2Q8N945 189 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 C12orf42Q96LP6 360 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 RUNDC3BQ96NL0 473 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 TXLNGYQ9BZA5 131 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 RABEP2Q9H5N1 569 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 KIAA1586Q9HCI6 787 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 CYP26B1Q9NR63 512 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 ZNF214Q9UL59 606 aaPredicted RBP17.79■□□□□ 0.44
VCAN-204ENST00000502527 MTUS1Q9ULD2 1270 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 PCDHA3Q9Y5H8 950 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 ADGRA3Q8IWK6 1321 aa17.79■□□□□ 0.44
VCAN-204ENST00000502527 RGS20O76081 388 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 HPDP32754 393 aaPredicted RBP17.78■□□□□ 0.44
VCAN-204ENST00000502527 PTGIRP43119 386 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 PRKCEQ02156 737 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 GNPTABQ3T906 1256 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 B4GALNT4Q76KP1 1039 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 DDX1Q92499 740 aaKnown RBP17.78■□□□□ 0.44
VCAN-204ENST00000502527 ZKSCAN4Q969J2 545 aaPredicted RBP17.78■□□□□ 0.44
VCAN-204ENST00000502527 C18orf8Q96DM3 657 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 WRNIP1Q96S55 665 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 FAM213AQ9BRX8 229 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 XPNPEP1Q9NQW7 623 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 CNOT7Q9UIV1 285 aaKnown RBP17.78■□□□□ 0.44
VCAN-204ENST00000502527 ATP8A1Q9Y2Q0 1164 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 C19orf81C9J6K1 198 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 NFKBIEO00221 500 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 ATP2A1O14983 1001 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 KIAA0391O15091 583 aaKnown RBP17.78■□□□□ 0.44
VCAN-204ENST00000502527 KRT5P13647 590 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 MAGEA9P43362 315 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 HMGCS2P54868 508 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 ACTR2P61160 394 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 PTGISQ16647 500 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 MIS18BP1Q6P0N0 1132 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 ABHD15Q6UXT9 468 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 TATDN2Q93075 761 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 POLR3FQ9H1D9 316 aaPredicted RBP17.78■□□□□ 0.44
VCAN-204ENST00000502527 CYP39A1Q9NYL5 469 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 ARHGAP28Q9P2N2 729 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 PARP2Q9UGN5 583 aa17.78■□□□□ 0.44
VCAN-204ENST00000502527 SPATA31C2B4DYI2 1134 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 PYGMP11217 842 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 BAG6P46379 1132 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 RWDD2BP57060 319 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 IFFO1Q0D2I5 559 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 TMEM132BQ14DG7 1078 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 KCTD19Q17RG1 926 aaPredicted RBP17.77■□□□□ 0.44
VCAN-204ENST00000502527 CLEC16AQ2KHT3 1053 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 XKR3Q5GH77 459 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 SLC13A5Q86YT5 568 aaPredicted RBP17.77■□□□□ 0.44
VCAN-204ENST00000502527 CCDC60Q8IWA6 550 aaPredicted RBP17.77■□□□□ 0.44
VCAN-204ENST00000502527 DHX38Q92620 1227 aaKnown RBP17.77■□□□□ 0.44
VCAN-204ENST00000502527 TEX13BQ9BXU2 312 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms