RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 ACSL3O95573 720 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 DBTP11182 482 aaKnown RBP5.04□□□□□ -1.6
NEAT1-202ENST00000501122 KRT28Q7Z3Y7 464 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 NECAB2Q7Z6G3 386 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 SPATA4Q8NEY3 305 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 AZI2Q9H6S1 392 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 ZNF212Q9UDV6 495 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 TRMUO75648 421 aaKnown RBP5.04□□□□□ -1.6
NEAT1-202ENST00000501122 NOL4O94818 638 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 CYP4F22Q6NT55 531 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 KRT78Q8N1N4 520 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 SCYL1Q96KG9 808 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 AGTPBP1Q9UPW5 1226 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 NOC2LQ9Y3T9 749 aaKnown RBP5.04□□□□□ -1.6
NEAT1-202ENST00000501122 SOX6P35712 828 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 ZMYM1Q5SVZ6 1142 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 XXYLT1Q8NBI6 393 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 KIFC1Q9BW19 673 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 CCDC194A0A1B0GVG4 234 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 KCNJ18B7U540 433 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 SNAP23O00161 211 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 NPR2P20594 1047 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 KCNJ12Q14500 433 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 TMED2Q15363 201 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 ZNF589Q86UQ0 364 aaPredicted RBP5.04□□□□□ -1.6
NEAT1-202ENST00000501122 PHC2Q8IXK0 858 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 TCEANC2Q96MN5 208 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 PCDHGA4Q9Y5G9 962 aa5.04□□□□□ -1.6
NEAT1-202ENST00000501122 SMNDC1O75940 238 aaKnown RBP eCLIP5.03□□□□□ -1.62e-24■□□□□ 8.1
NEAT1-202ENST00000501122 SRGAP2CP0DJJ0 459 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 SRGAP2BP0DMP2 458 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 PLS3P13797 630 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 STAMQ92783 540 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 PLEKHA8Q96JA3 519 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 SYNRGQ9UMZ2 1314 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 RASA4BC9J798 803 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 RASA4O43374 803 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 GPD2P43304 727 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 CLVS1Q8IUQ0 354 aaPredicted RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 ARHGEF37A1IGU5 675 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 ZNF846Q147U1 533 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 CCDC142Q17RM4 750 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 ANKS6Q68DC2 871 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 TSPAN14Q8NG11 270 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 SPRTNQ9H040 489 aaPredicted RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 IRF2BPLQ9H1B7 796 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 ECHDC1Q9NTX5 307 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 IDH1O75874 414 aaKnown RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 UBOX5O94941 541 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 NDUFA10O95299 355 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 CHMLP26374 656 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 IL12AP29459 219 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 VAC14Q08AM6 782 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 CORO6Q6QEF8 472 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 TK2O00142 265 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 CHN1P15882 459 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 ACADVLP49748 655 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 ALDH5A1P51649 535 aaPredicted RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 GABPAQ06546 454 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 GRSF1Q12849 480 aaKnown RBP eCLIP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 STYK1Q6J9G0 422 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 DUSP9Q99956 384 aaKnown RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 H0YJX3 145 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 HOXA2O43364 376 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 ZBTB11O95625 1053 aaPredicted RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 ETS2P15036 469 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 BRAFP15056 766 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 CCNFP41002 786 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 GDPD5Q8WTR4 605 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 AIFM3Q96NN9 605 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 SASH3O75995 380 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 OXSR1O95747 527 aaPredicted RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 ENDOUP21128 410 aaKnown RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 PTDSS1P48651 473 aaKnown RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 PLOD1Q02809 727 aaPredicted RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 LRRC8EQ6NSJ5 796 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 WNK4Q96J92 1243 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 CYP2E1P05181 493 aaPredicted RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 FDPSP14324 419 aaKnown RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 KRT31Q15323 416 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 TRMT5Q32P41 509 aaKnown RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 CNPY1Q3B7I2 92 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 PALB2Q86YC2 1186 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 CIDECQ96AQ7 238 aaPredicted RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 SNF8Q96H20 258 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 FAM207AQ9NSI2 230 aaPredicted RBP5.03□□□□□ -1.6
NEAT1-202ENST00000501122 GRID2IPA4D2P6 1211 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 SCAMP1O15126 338 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 CDC16Q13042 620 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 OSBPL11Q9BXB4 747 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 NAPBQ9H115 298 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 SNX7Q9UNH6 387 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 STX8Q9UNK0 236 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 AGTP01019 485 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 METAP2P50579 478 aaKnown RBP eCLIP5.03□□□□□ -1.66e-21■■■□□ 14.9
NEAT1-202ENST00000501122 BCAP31P51572 246 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 ZNF45Q02386 682 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 OCLNQ16625 522 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 STK33Q9BYT3 514 aa5.03□□□□□ -1.6
NEAT1-202ENST00000501122 METTL8Q9H825 291 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms