RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 ECM1Q16610 540 aa28.59■■■□□ 2.17
CUL4A-211ENST00000498562 MAPK6Q16659 721 aa28.59■■■□□ 2.17
CUL4A-211ENST00000498562 HAUS3Q68CZ6 603 aa28.59■■■□□ 2.17
CUL4A-211ENST00000498562 NOSTRINQ8IVI9 506 aa28.59■■■□□ 2.17
CUL4A-211ENST00000498562 RIN2Q8WYP3 895 aaPredicted RBP28.59■■■□□ 2.17
CUL4A-211ENST00000498562 ZNF707Q96C28 371 aaPredicted RBP28.59■■■□□ 2.17
CUL4A-211ENST00000498562 KCNK12Q9HB15 430 aa28.59■■■□□ 2.17
CUL4A-211ENST00000498562 SNTG2Q9NY99 539 aa28.59■■■□□ 2.17
CUL4A-211ENST00000498562 USP20Q9Y2K6 914 aa28.59■■■□□ 2.17
CUL4A-211ENST00000498562 CACNA1HO95180 2353 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 TGM5O43548 720 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 GALR2O43603 387 aaPredicted RBP28.58■■■□□ 2.17
CUL4A-211ENST00000498562 SPATA31D3P0C874 917 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 TRAPPC10P48553 1259 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 RBM25P49756 843 aaKnown RBP28.58■■■□□ 2.17
CUL4A-211ENST00000498562 TDGQ13569 410 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 NBR1Q14596 966 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 SPATA31D4Q6ZUB0 917 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 PALB2Q86YC2 1186 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 GLYCTKQ8IVS8 523 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 C4orf32Q8N8J7 132 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 PLEKHA4Q9H4M7 779 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 DUSP12Q9UNI6 340 aa28.58■■■□□ 2.17
CUL4A-211ENST00000498562 DOCK8Q8NF50 2099 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 CASTOR2A6NHX0 329 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 ACKR2O00590 384 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 TADA2AO75478 443 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 RECQL4O94761 1208 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 RPL17P18621 184 aaKnown RBP28.57■■■□□ 2.16
CUL4A-211ENST00000498562 FXR2P51116 673 aaKnown RBP eCLIP28.57■■■□□ 2.16
CUL4A-211ENST00000498562 NAB2Q15742 525 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 TMEM132AQ24JP5 1023 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 RTP2Q5QGT7 225 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 LILRA6Q6PI73 481 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 DEPTORQ8TB45 409 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 SMG7Q92540 1137 aaKnown RBP28.57■■■□□ 2.16
CUL4A-211ENST00000498562 ZSCAN31Q96LW9 406 aaPredicted RBP28.57■■■□□ 2.16
CUL4A-211ENST00000498562 IRF2BPLQ9H1B7 796 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 CXCL16Q9H2A7 254 aa28.57■■■□□ 2.16
CUL4A-211ENST00000498562 SF3B1O75533 1304 aaKnown RBP eCLIP28.57■■■□□ 2.163e-6■■■■■ 137.9
CUL4A-211ENST00000498562 MYO15AQ9UKN7 3530 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 KIF4AO95239 1232 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 CCT6AP40227 531 aaKnown RBP28.56■■■□□ 2.16
CUL4A-211ENST00000498562 CREMQ03060 361 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 GNL2Q13823 731 aaKnown RBP28.56■■■□□ 2.16
CUL4A-211ENST00000498562 PPP2R5AQ15172 486 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 EEF1DP3Q658K8 133 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 ASTLQ6HA08 431 aaPredicted RBP28.56■■■□□ 2.16
CUL4A-211ENST00000498562 PRSS55Q6UWB4 352 aaPredicted RBP28.56■■■□□ 2.16
CUL4A-211ENST00000498562 HASPINQ8TF76 798 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 STAMQ92783 540 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 KIF2CQ99661 725 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 ADPGKQ9BRR6 497 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 KIFC3Q9BVG8 833 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 MFSD1Q9H3U5 465 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 ZDHHC7Q9NXF8 308 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 IGSF9Q9P2J2 1179 aa28.56■■■□□ 2.16
CUL4A-211ENST00000498562 VWA8A3KMH1 1905 aa28.55■■■□□ 2.16
CUL4A-211ENST00000498562 H0Y858 1186 aa28.55■■■□□ 2.16
CUL4A-211ENST00000498562 THP07101 528 aa28.55■■■□□ 2.16
CUL4A-211ENST00000498562 LIG1P18858 919 aa28.55■■■□□ 2.16
CUL4A-211ENST00000498562 CWF19L1Q69YN2 538 aaKnown RBP28.55■■■□□ 2.16
CUL4A-211ENST00000498562 FAM184AQ8NB25 1140 aa28.55■■■□□ 2.16
CUL4A-211ENST00000498562 ATOH1Q92858 354 aaPredicted RBP28.55■■■□□ 2.16
CUL4A-211ENST00000498562 NT5C3AQ9H0P0 336 aa28.55■■■□□ 2.16
CUL4A-211ENST00000498562 BHMT2Q9H2M3 363 aa28.55■■■□□ 2.16
CUL4A-211ENST00000498562 SH2B1Q9NRF2 756 aaPredicted RBP28.55■■■□□ 2.16
CUL4A-211ENST00000498562 NOL7Q9UMY1 257 aaKnown RBP28.55■■■□□ 2.16
CUL4A-211ENST00000498562 GBP2P32456 591 aaPredicted RBP28.54■■■□□ 2.16
CUL4A-211ENST00000498562 MYADMQ96S97 322 aa28.54■■■□□ 2.16
CUL4A-211ENST00000498562 POLD4Q9HCU8 107 aa28.54■■■□□ 2.16
CUL4A-211ENST00000498562 EPS15L1Q9UBC2 864 aa28.54■■■□□ 2.16
CUL4A-211ENST00000498562 LRWD1Q9UFC0 647 aa28.54■■■□□ 2.16
CUL4A-211ENST00000498562 U2AF2P26368 475 aaKnown RBP eCLIP28.53■■■□□ 2.162e-7■■■■■ 27.4
CUL4A-211ENST00000498562 CLCN5P51795 746 aa28.53■■■□□ 2.16
CUL4A-211ENST00000498562 DCAF4L1Q3SXM0 396 aa28.53■■■□□ 2.16
CUL4A-211ENST00000498562 PIK3R5Q8WYR1 880 aa28.53■■■□□ 2.16
CUL4A-211ENST00000498562 KIFAP3Q92845 792 aa28.53■■■□□ 2.16
CUL4A-211ENST00000498562 IFT74Q96LB3 600 aa28.53■■■□□ 2.16
CUL4A-211ENST00000498562 PRKD2Q9BZL6 878 aa28.53■■■□□ 2.16
CUL4A-211ENST00000498562 EFNA5P52803 228 aa28.52■■■□□ 2.16
CUL4A-211ENST00000498562 NT5DC1Q5TFE4 455 aa28.52■■■□□ 2.16
CUL4A-211ENST00000498562 IGSF22Q8N9C0 903 aa28.52■■■□□ 2.16
CUL4A-211ENST00000498562 RSAD2Q8WXG1 361 aa28.52■■■□□ 2.16
CUL4A-211ENST00000498562 TTPALQ9BTX7 342 aa28.52■■■□□ 2.16
CUL4A-211ENST00000498562 KIAA1024Q9UPX6 916 aa28.52■■■□□ 2.16
CUL4A-211ENST00000498562 TRIP11Q15643 1979 aa28.51■■■□□ 2.16
CUL4A-211ENST00000498562 NARSO43776 548 aaKnown RBP28.51■■■□□ 2.15
CUL4A-211ENST00000498562 NPR3P17342 541 aa28.51■■■□□ 2.15
CUL4A-211ENST00000498562 TOB1P50616 345 aaPredicted RBP28.51■■■□□ 2.15
CUL4A-211ENST00000498562 PDIA5Q14554 519 aa28.51■■■□□ 2.15
CUL4A-211ENST00000498562 FAM171A1Q5VUB5 890 aa28.51■■■□□ 2.15
CUL4A-211ENST00000498562 FLCNQ8NFG4 579 aa28.51■■■□□ 2.15
CUL4A-211ENST00000498562 LNX1Q8TBB1 728 aaPredicted RBP28.51■■■□□ 2.15
CUL4A-211ENST00000498562 SNX29Q8TEQ0 813 aa28.51■■■□□ 2.15
CUL4A-211ENST00000498562 CLSTN3Q9BQT9 956 aa28.51■■■□□ 2.15
CUL4A-211ENST00000498562 PIDD1Q9HB75 910 aa28.51■■■□□ 2.15
CUL4A-211ENST00000498562 DDX19AQ9NUU7 478 aaKnown RBP28.51■■■□□ 2.15
CUL4A-211ENST00000498562 FBXW11Q9UKB1 542 aa28.51■■■□□ 2.15
CUL4A-211ENST00000498562 GDAQ9Y2T3 454 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms