RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 MTRQ99707 1265 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 RNF26Q9BY78 433 aaPredicted RBP12.99□□□□□ -0.33
CDK9-205ENST00000498339 CSRNP2Q9H175 543 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 DHX33Q9H6R0 707 aaKnown RBP12.99□□□□□ -0.33
CDK9-205ENST00000498339 KLK14Q9P0G3 267 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 CACNG4Q9UBN1 327 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 PARP2Q9UGN5 583 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 MRPS17Q9Y2R5 130 aaKnown RBP12.99□□□□□ -0.33
CDK9-205ENST00000498339 GIT1Q9Y2X7 761 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 NOTCH4Q99466 2003 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 PDCD11Q14690 1871 aaKnown RBP12.99□□□□□ -0.33
CDK9-205ENST00000498339 EML1O00423 815 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 ASAP2O43150 1006 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 EDIL3O43854 480 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 MARCH6O60337 910 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 LILRB5O75023 590 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 PAPLNO95428 1278 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 NPTXRO95502 500 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 SPEM2Q0P670 501 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 TFDP1Q14186 410 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 HSP90AA2PQ14568 343 aaPredicted RBP12.98□□□□□ -0.33
CDK9-205ENST00000498339 PPP2R5DQ14738 602 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 PSMD5Q16401 504 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 XKR9Q5GH70 373 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 RTP2Q5QGT7 225 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 B3GNT9Q6UX72 402 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 ZNF852Q6ZMS4 543 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 SLC7A14Q8TBB6 771 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 ETNPPLQ8TBG4 499 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 MBOAT7Q96N66 472 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 LXNQ9BS40 222 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 TTPALQ9BTX7 342 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 PARD6AQ9NPB6 346 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 NDRG2Q9UN36 371 aaKnown RBP12.98□□□□□ -0.33
CDK9-205ENST00000498339 PPME1Q9Y570 386 aa12.98□□□□□ -0.33
CDK9-205ENST00000498339 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.98□□□□□ -0.33
CDK9-205ENST00000498339 NID2Q14112 1375 aa12.97□□□□□ -0.33
CDK9-205ENST00000498339 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.97□□□□□ -0.33
CDK9-205ENST00000498339 CASTOR2A6NHX0 329 aa12.97□□□□□ -0.33
CDK9-205ENST00000498339 YWHABP31946 246 aaKnown RBP12.97□□□□□ -0.33
CDK9-205ENST00000498339 PCBP1Q15365 356 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDK9-205ENST00000498339 PABPC1LQ4VXU2 614 aaKnown RBP12.97□□□□□ -0.33
CDK9-205ENST00000498339 FAM171A1Q5VUB5 890 aa12.97□□□□□ -0.33
CDK9-205ENST00000498339 OTUD6AQ7L8S5 288 aa12.97□□□□□ -0.33
CDK9-205ENST00000498339 NPAS3Q8IXF0 933 aa12.97□□□□□ -0.33
CDK9-205ENST00000498339 GPR65Q8IYL9 337 aa12.97□□□□□ -0.33
CDK9-205ENST00000498339 TRIM22Q8IYM9 498 aa12.97□□□□□ -0.33
CDK9-205ENST00000498339 YTHDC1Q96MU7 727 aaKnown RBP12.97□□□□□ -0.33
CDK9-205ENST00000498339 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
CDK9-205ENST00000498339 NELL2Q99435 816 aa12.97□□□□□ -0.33
CDK9-205ENST00000498339 PRMT8Q9NR22 394 aaPredicted RBP12.97□□□□□ -0.33
CDK9-205ENST00000498339 HEBP1Q9NRV9 189 aa12.97□□□□□ -0.33
CDK9-205ENST00000498339 HCFC1R1Q9NWW0 138 aa12.97□□□□□ -0.33
CDK9-205ENST00000498339 PCDHA4Q9UN74 947 aa12.97□□□□□ -0.33
CDK9-205ENST00000498339 SLC37A4O43826 429 aa12.96□□□□□ -0.33
CDK9-205ENST00000498339 P4HBP07237 508 aaKnown RBP12.96□□□□□ -0.33
CDK9-205ENST00000498339 HOXA9P31269 272 aa12.96□□□□□ -0.33
CDK9-205ENST00000498339 NRLP54845 237 aa12.96□□□□□ -0.33
CDK9-205ENST00000498339 CCT2P78371 535 aaKnown RBP12.96□□□□□ -0.33
CDK9-205ENST00000498339 ADCY1Q08828 1119 aa12.96□□□□□ -0.33
CDK9-205ENST00000498339 MTAPQ13126 283 aa12.96□□□□□ -0.33
CDK9-205ENST00000498339 MXD4Q14582 209 aaPredicted RBP12.96□□□□□ -0.33
CDK9-205ENST00000498339 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.33
CDK9-205ENST00000498339 NCAPH2Q6IBW4 605 aa12.96□□□□□ -0.33
CDK9-205ENST00000498339 CDR2LQ86X02 465 aaPredicted RBP12.96□□□□□ -0.33
CDK9-205ENST00000498339 NETO1Q8TDF5 533 aa12.96□□□□□ -0.33
CDK9-205ENST00000498339 JAKMIP1Q96N16 626 aaKnown RBP12.96□□□□□ -0.33
CDK9-205ENST00000498339 CLSTN3Q9BQT9 956 aa12.96□□□□□ -0.33
CDK9-205ENST00000498339 PAAF1Q9BRP4 392 aa12.96□□□□□ -0.33
CDK9-205ENST00000498339 FAM126AQ9BYI3 521 aaPredicted RBP12.96□□□□□ -0.33
CDK9-205ENST00000498339 SH3GLB2Q9NR46 395 aa12.96□□□□□ -0.33
CDK9-205ENST00000498339 WRAP73Q9P2S5 460 aaPredicted RBP12.96□□□□□ -0.33
CDK9-205ENST00000498339 MRPS23Q9Y3D9 190 aaKnown RBP12.96□□□□□ -0.33
CDK9-205ENST00000498339 TRIP11Q15643 1979 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 CYP3A7-CYP3A51PA0A087WV96 503 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 KIF4AO95239 1232 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 ARF4P18085 180 aaPredicted RBP12.95□□□□□ -0.34
CDK9-205ENST00000498339 CYP3A7P24462 503 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 RPS9P46781 194 aaKnown RBP12.95□□□□□ -0.34
CDK9-205ENST00000498339 PTENP60484 403 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 CYP4A11Q02928 519 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 MBTD1Q05BQ5 628 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 PPP2R5CQ13362 524 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 TUSC3Q13454 348 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 TMEM132AQ24JP5 1023 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 INF2Q27J81 1249 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 LAIR1Q6GTX8 287 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 PDXDC1Q6P996 788 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 SLC27A1Q6PCB7 646 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 BLOC1S2Q6QNY1 142 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 MOXD1Q6UVY6 613 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.95□□□□□ -0.34
CDK9-205ENST00000498339 BLIDQ8IZY5 108 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 PIK3R5Q8WYR1 880 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 CLDN23Q96B33 292 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 MCRS1Q96EZ8 462 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 NCOA5Q9HCD5 579 aaKnown RBP12.95□□□□□ -0.34
CDK9-205ENST00000498339 VAV3Q9UKW4 847 aa12.95□□□□□ -0.34
CDK9-205ENST00000498339 SLC30A4O14863 429 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms