RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SLC39A14Q15043 492 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 SHHQ15465 462 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 CCDC96Q2M329 555 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 ZSCAN23Q3MJ62 389 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 C9orf50Q5SZB4 431 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 DCAF15Q66K64 600 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 SLFN13Q68D06 897 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 ADALQ6DHV7 355 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 CCDC73Q6ZRK6 1079 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 SPPL2CQ8IUH8 684 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 BLIDQ8IZY5 108 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 LRRC47Q8N1G4 583 aaKnown RBP6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 LINC00301Q8NCQ3 95 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 FEZF2Q8TBJ5 459 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 PIBF1Q8WXW3 757 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 SIGLEC10Q96LC7 697 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 Q96M66 194 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 KRTAP9-8Q9BYQ0 159 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 RIOX1Q9H6W3 641 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 VAT1LQ9HCJ6 419 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 C6orf50Q9HD87 102 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 DDX19AQ9NUU7 478 aaKnown RBP6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 BARHL2Q9NY43 387 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 THEGQ9P2T0 379 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 BDP1A6H8Y1 2624 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 ADGRA2Q96PE1 1338 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 ZFHX4Q86UP3 3567 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 SIPA1L1O43166 1804 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 PNMA6FA0A0J9YX94 578 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 CCDC194A0A1B0GVG4 234 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 A0A1W2PQ27 194 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 A0A1W2PQ64 194 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 A0A1W2PQD8 194 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 hCG_1642624A0A1W2PR95 340 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 TRIM75PA6NK02 468 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 F5H6K3 240 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 CYTH3O43739 400 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 GH2P01242 217 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 ASNSP08243 561 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 CELA3AP09093 270 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 SLC1A4P43007 532 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 TRAPPC10P48553 1259 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 GTF2A2P52657 109 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 NAPAP54920 295 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 NHLH1Q02575 133 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 KLRC3Q07444 240 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 TRAF1Q13077 416 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 LRRC26Q2I0M4 334 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 HEATR3Q7Z4Q2 680 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 CCAR1Q8IX12 1150 aaKnown RBP6□□□□□ -1.45
HMGXB4-208ENST00000498325 DAGLBQ8NCG7 672 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 GMCL1P1Q8NEA9 526 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 DACT3Q96B18 629 aaPredicted RBP6□□□□□ -1.45
HMGXB4-208ENST00000498325 PGBD1Q96JS3 809 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 TMEM39BQ9GZU3 492 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 UBA5Q9GZZ9 404 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 XRN2Q9H0D6 950 aaKnown RBP eCLIP6□□□□□ -1.45
HMGXB4-208ENST00000498325 GLT8D2Q9H1C3 349 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 PCDHA7Q9UN72 937 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 PPP2R3BQ9Y5P8 575 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 CLIC4Q9Y696 253 aa6□□□□□ -1.45
HMGXB4-208ENST00000498325 FRMPD2Q68DX3 1309 aaPredicted RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 GREB1LQ9C091 1923 aaPredicted RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 MYH4Q9Y623 1939 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 ESYT2A0FGR8 921 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 SMCO2A6NFE2 343 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 STXBP3O00186 592 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 CTAGE5O15320 804 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 CTNND1O60716 968 aaKnown RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 KINO60870 393 aaKnown RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 CUTAO60888 179 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 CAPN2P17655 700 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 CMA1P23946 247 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 FLT3LGP49771 235 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 MRPL12P52815 198 aaKnown RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 SMAD3P84022 425 aaKnown RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 CHRNEQ04844 493 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 IKQ13123 557 aaPredicted RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 VGLL4Q14135 290 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 ZXDCQ2QGD7 858 aaPredicted RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 SUPT20HL1Q3ZLR7 823 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 MCTP2Q6DN12 878 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 LRSAM1Q6UWE0 723 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 KCTD1Q719H9 257 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 MIGA2Q7L4E1 593 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 TMC7Q7Z402 723 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 TSPYL5Q86VY4 417 aaPredicted RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 HOMER1Q86YM7 354 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 ADGRF4Q8IZF3 695 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 ZDHHC14Q8IZN3 488 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 CHURC1Q8WUH1 139 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 MRPS27Q92552 414 aaKnown RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 GAL3ST3Q96A11 431 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 PIGSQ96S52 555 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 DPH2Q9BQC3 489 aaPredicted RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 ZNF341Q9BYN7 854 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 GPR62Q9BZJ7 368 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 ZMYND12Q9H0C1 365 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 NUP62CLQ9H1M0 184 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms