RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 NPAS4Q8IUM7 802 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 ABI1Q8IZP0 508 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 GPD1LQ8N335 351 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 RDH13Q8NBN7 331 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 LPPQ93052 612 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 FAM161BQ96MY7 647 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 ACAP3Q96P50 834 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 CBWD1Q9BRT8 395 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 FAM213AQ9BRX8 229 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 HAPLN2Q9GZV7 340 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 NAT10Q9H0A0 1025 aaKnown RBP12.48□□□□□ -0.41
CTTN-208ENST00000498223 KCTD10Q9H3F6 313 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 SEMA6BQ9H3T3 888 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 RPF1Q9H9Y2 349 aaKnown RBP12.48□□□□□ -0.41
CTTN-208ENST00000498223 PTPRHQ9HD43 1115 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 SNTG2Q9NY99 539 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 HSPBP1Q9NZL4 362 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 FRMD4BQ9Y2L6 1034 aa12.48□□□□□ -0.41
CTTN-208ENST00000498223 TMEM265A0A087WTH1 108 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 A0A0B4J269 797 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 CETN3O15182 167 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 EOMESO95936 686 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 NR2F2P24468 414 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 AKAP5P24588 427 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 GRM5P41594 1212 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 ACOT2P49753 483 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 LRRC63Q05C16 580 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 ADAM9Q13443 819 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 ANKRD40Q6AI12 368 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 CENPPQ6IPU0 288 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 CREBRFQ8IUR6 639 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 CEP120Q8N960 986 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 XXYLT1Q8NBI6 393 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 SMG8Q8ND04 991 aaKnown RBP12.47□□□□□ -0.41
CTTN-208ENST00000498223 RPS6KC1Q96S38 1066 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 TRAIPQ9BWF2 469 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 DNAJC25Q9H1X3 360 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 ELAC1Q9H777 363 aaKnown RBP12.47□□□□□ -0.41
CTTN-208ENST00000498223 TMEM161AQ9NX61 479 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 KLK14Q9P0G3 267 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 CXXC1Q9P0U4 656 aaPredicted RBP12.47□□□□□ -0.41
CTTN-208ENST00000498223 RWDD2AQ9UIY3 292 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 TRAF3IP3Q9Y228 551 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 INPP5FQ9Y2H2 1132 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 STYXL1Q9Y6J8 313 aa12.47□□□□□ -0.41
CTTN-208ENST00000498223 LAMA2P24043 3122 aaKnown RBP12.46□□□□□ -0.41
CTTN-208ENST00000498223 KIAA1671Q9BY89 1806 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 ZNF233A6NK53 670 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 ABLIM1O14639 778 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 HOXA2O43364 376 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 EXTL3O43909 919 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 ZNF623O75123 536 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 RECQL4O94761 1208 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 FGFR1OPO95684 399 aaKnown RBP12.46□□□□□ -0.41
CTTN-208ENST00000498223 CLTAP09496 248 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 FGFR1P11362 822 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 ATP2A2P16615 1042 aaKnown RBP12.46□□□□□ -0.41
CTTN-208ENST00000498223 ADSSP30520 456 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 TNFSF9P41273 254 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 PMS1P54277 932 aaKnown RBP12.46□□□□□ -0.41
CTTN-208ENST00000498223 FAM189BP81408 668 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 EDRF1Q3B7T1 1238 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 ANO6Q4KMQ2 910 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 GLB1LQ6UWU2 654 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 TMCO2Q7Z6W1 182 aaPredicted RBP12.46□□□□□ -0.41
CTTN-208ENST00000498223 MRPL10Q7Z7H8 261 aaKnown RBP12.46□□□□□ -0.41
CTTN-208ENST00000498223 CSGALNACT2Q8N6G5 542 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 URGCPQ8TCY9 931 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 HELQQ8TDG4 1101 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 EEF2KMTQ96G04 330 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 SLC9A7Q96T83 725 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 RSAD1Q9HA92 442 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 KIAA1586Q9HCI6 787 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 UBN1Q9NPG3 1134 aa12.46□□□□□ -0.41
CTTN-208ENST00000498223 TOPORSQ9NS56 1045 aaPredicted RBP12.46□□□□□ -0.41
CTTN-208ENST00000498223 TBKBP1A7MCY6 615 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 CXCL8P10145 99 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 EPB41P11171 864 aaKnown RBP12.45□□□□□ -0.42
CTTN-208ENST00000498223 ERCC5P28715 1186 aaPredicted RBP12.45□□□□□ -0.42
CTTN-208ENST00000498223 FKBP3Q00688 224 aaKnown RBP12.45□□□□□ -0.42
CTTN-208ENST00000498223 PPP2R3AQ06190 1150 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 PAN2Q504Q3 1202 aaKnown RBP12.45□□□□□ -0.42
CTTN-208ENST00000498223 CT47A1Q5JQC4 288 aaPredicted RBP12.45□□□□□ -0.42
CTTN-208ENST00000498223 ZBTB41Q5SVQ8 909 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 C11orf57Q6ZUT1 292 aaPredicted RBP12.45□□□□□ -0.42
CTTN-208ENST00000498223 C12orf56Q8IXR9 622 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 TMEM192Q8IY95 271 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 ZSWIM2Q8NEG5 633 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 TOP1MTQ969P6 601 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 FAM193BQ96PV7 902 aaPredicted RBP12.45□□□□□ -0.42
CTTN-208ENST00000498223 YME1L1Q96TA2 773 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 GAD1Q99259 594 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 CDX2Q99626 313 aaPredicted RBP12.45□□□□□ -0.42
CTTN-208ENST00000498223 ANP32EQ9BTT0 268 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 SRRTQ9BXP5 876 aaKnown RBP12.45□□□□□ -0.42
CTTN-208ENST00000498223 TTYH1Q9H313 450 aaPredicted RBP12.45□□□□□ -0.42
CTTN-208ENST00000498223 TSPY26PQ9H489 355 aa12.45□□□□□ -0.42
CTTN-208ENST00000498223 RBAKQ9NYW8 714 aaPredicted RBP12.45□□□□□ -0.42
CTTN-208ENST00000498223 GIT1Q9Y2X7 761 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms