RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 SESN3P58005 492 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 UGT8Q16880 541 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 MST1LQ2TV78 715 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 FAM47AQ5JRC9 791 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 PRAMEF14Q5SWL7 426 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 SPATA31D4Q6ZUB0 917 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 LCORLQ8N3X6 602 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 RNF169Q8NCN4 708 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 CLRN3Q8NCR9 226 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 SUPT20HQ8NEM7 779 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 ZFP28Q8NHY6 868 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 NTN5Q8WTR8 489 aaPredicted RBP4.95□□□□□ -1.62
CBX3-208ENST00000497498 RAX2Q96IS3 184 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 ACAP3Q96P50 834 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 NEU1Q99519 415 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 ADAM2Q99965 735 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 IFT22Q9H7X7 185 aa4.95□□□□□ -1.62
CBX3-208ENST00000497498 DRGXA6NNA5 263 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 NEMP1O14524 444 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 ULK1O75385 1050 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 HLA-DOAP06340 250 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 TYRP1P17643 537 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 DDX6P26196 483 aaKnown RBP eCLIP4.94□□□□□ -1.62
CBX3-208ENST00000497498 AVPR1BP47901 424 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 CLK3P49761 638 aaKnown RBP4.94□□□□□ -1.62
CBX3-208ENST00000497498 GUCY1B3Q02153 619 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 CCDC142Q17RM4 750 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.94□□□□□ -1.62
CBX3-208ENST00000497498 RNF180Q86T96 592 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 SLC35B2Q8TB61 432 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 USP7Q93009 1102 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 ZNF764Q96H86 408 aaPredicted RBP4.94□□□□□ -1.62
CBX3-208ENST00000497498 BBC3Q96PG8 261 aaPredicted RBP4.94□□□□□ -1.62
CBX3-208ENST00000497498 FPGT-TNNI3KV9GXZ4 949 aa4.94□□□□□ -1.62
CBX3-208ENST00000497498 ATRNL1Q5VV63 1379 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 KIAA0355O15063 1070 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 ADCY6O43306 1168 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 EGR2P11161 476 aaPredicted RBP4.93□□□□□ -1.62
CBX3-208ENST00000497498 CANXP27824 592 aaKnown RBP4.93□□□□□ -1.62
CBX3-208ENST00000497498 ID4P47928 161 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 SEC24CP53992 1094 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 CLRN1P58418 232 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 BLOC1S1P78537 153 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 ABHD17BQ5VST6 288 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 AGAP9Q5VTM2 703 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 ARMC6Q6NXE6 501 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 ZNF572Q7Z3I7 529 aaPredicted RBP4.93□□□□□ -1.62
CBX3-208ENST00000497498 ADGRG3Q86Y34 549 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 CMTR2Q8IYT2 770 aaKnown RBP4.93□□□□□ -1.62
CBX3-208ENST00000497498 GPR156Q8NFN8 814 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 TTC1Q99614 292 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 BCO1Q9HAY6 547 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 DPP7Q9UHL4 492 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 USP15Q9Y4E8 981 aaPredicted RBP4.93□□□□□ -1.62
CBX3-208ENST00000497498 TNFRSF18Q9Y5U5 241 aa4.93□□□□□ -1.62
CBX3-208ENST00000497498 UNC119BA6NIH7 251 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 CXorf49A8MYA2 514 aaPredicted RBP4.92□□□□□ -1.62
CBX3-208ENST00000497498 SPDEFO95238 335 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 CFIP05156 583 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 SNRPA1P09661 255 aaKnown RBP4.92□□□□□ -1.62
CBX3-208ENST00000497498 HKR1P10072 659 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 CHN2P52757 468 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 MRPS9P82933 396 aaKnown RBP4.92□□□□□ -1.62
CBX3-208ENST00000497498 FOXI1Q12951 378 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 TP53BP2Q13625 1128 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 ATXN7L2Q5T6C5 722 aaPredicted RBP4.92□□□□□ -1.62
CBX3-208ENST00000497498 STRIP1Q5VSL9 837 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 Q6ZVL8 140 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 DDX46Q7L014 1031 aaKnown RBP4.92□□□□□ -1.62
CBX3-208ENST00000497498 THNSL2Q86YJ6 484 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 RHOT2Q8IXI1 618 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 TRMT2AQ8IZ69 625 aaKnown RBP4.92□□□□□ -1.62
CBX3-208ENST00000497498 REPS2Q8NFH8 660 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 OR7D4Q8NG98 312 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 TSPEARQ8WU66 669 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 RIN2Q8WYP3 895 aaPredicted RBP4.92□□□□□ -1.62
CBX3-208ENST00000497498 ORAI2Q96SN7 254 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 PTGFRNQ9P2B2 879 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 SCOCQ9UIL1 159 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 EDARQ9UNE0 448 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 PNPLA7Q6ZV29 1317 aa4.92□□□□□ -1.62
CBX3-208ENST00000497498 WNT10BO00744 389 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 AKR1B10O60218 316 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 ALOX15P16050 662 aaPredicted RBP4.91□□□□□ -1.62
CBX3-208ENST00000497498 PTPN7P35236 360 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 GYS2P54840 703 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 RESTQ13127 1097 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 ADRM1Q16186 407 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 PRR16Q569H4 304 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 GJC2Q5T442 439 aaPredicted RBP4.91□□□□□ -1.62
CBX3-208ENST00000497498 HDGFL2Q7Z4V5 671 aaPredicted RBP4.91□□□□□ -1.62
CBX3-208ENST00000497498 NPM2Q86SE8 214 aaKnown RBP4.91□□□□□ -1.62
CBX3-208ENST00000497498 ASB10Q8WXI3 467 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 PRDM13Q9H4Q3 707 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 ALG13Q9NP73 1137 aaKnown RBP4.91□□□□□ -1.62
CBX3-208ENST00000497498 APOBEC2Q9Y235 224 aaKnown RBP4.91□□□□□ -1.62
CBX3-208ENST00000497498 ATP11BQ9Y2G3 1177 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 MAP3K2Q9Y2U5 619 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 TBX22Q9Y458 520 aa4.91□□□□□ -1.62
CBX3-208ENST00000497498 COX11Q9Y6N1 276 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms