RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 FAM200BP0CF97 657 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 VSIG8P0DPA2 414 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 TYRP14679 529 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 GSPT1P15170 499 aaKnown RBP6.9□□□□□ -1.3
BRCA1-224ENST00000497488 ALOX12P18054 663 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 GMPRP36959 345 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 CASP6P55212 293 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 PLIN5Q00G26 463 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 MYBPC3Q14896 1274 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 DLGAP5Q15398 846 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 TTC38Q5R3I4 469 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 HECTD3Q5T447 861 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 SFRP5Q5T4F7 317 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 KIAA1841Q6NSI8 718 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 KCTD1Q719H9 257 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 SV2AQ7L0J3 742 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 RIOX2Q8IUF8 465 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 ADGRG2Q8IZP9 1017 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 DTWD1Q8N5C7 304 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 TOP6BLQ8N6T0 577 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 GPR161Q8N6U8 529 aaKnown RBP6.9□□□□□ -1.3
BRCA1-224ENST00000497488 OR2I1PQ8NGU4 316 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 OTUD7AQ8TE49 926 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-224ENST00000497488 IPO4Q8TEX9 1081 aaKnown RBP6.9□□□□□ -1.3
BRCA1-224ENST00000497488 FOXRED1Q96CU9 486 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-224ENST00000497488 TUBGCP5Q96RT8 1024 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 BAG1Q99933 345 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-224ENST00000497488 SEZ6LQ9BYH1 1024 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 GPR62Q9BZJ7 368 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 GREM2Q9H772 168 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 CD248Q9HCU0 757 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 SAYSD1Q9NPB0 183 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 PNPOQ9NVS9 261 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 TMEM160Q9NX00 188 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 IGSF9Q9P2J2 1179 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 CFDP1Q9UEE9 299 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-224ENST00000497488 TBC1D29Q9UFV1 150 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 CPA4Q9UI42 421 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 DENND2AQ9ULE3 1009 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 PCDHA3Q9Y5H8 950 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 SNX5Q9Y5X3 404 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 CCDC196A0A1B0GTZ2 297 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 PI4KAP2A4QPH2 592 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 SMTNL1A8MU46 457 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 WIPF1O43516 503 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 CELA3BP08861 270 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 ZSCAN22P10073 491 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-224ENST00000497488 EPXP11678 715 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 SRFP11831 508 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 PTPN1P18031 435 aaKnown RBP6.89□□□□□ -1.31
BRCA1-224ENST00000497488 CCR5P51681 352 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 PPARAQ07869 468 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 PPP3CAQ08209 521 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 MGAT2Q10469 447 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 ERV3-1Q14264 604 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 RAB30Q15771 203 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 UVSSAQ2YD98 709 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 C3orf38Q5JPI3 329 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 FAM26FQ5R3K3 315 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 ZMYM1Q5SVZ6 1142 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 FDX2Q6P4F2 183 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 FBXO38Q6PIJ6 1188 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 BTNL9Q6UXG8 535 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 UNQ6494/PRO21346Q6UXR6 183 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 CYP2R1Q6VVX0 501 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 CATSPERGQ6ZRH7 1159 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 KANSL1Q7Z3B3 1105 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 WAPLQ7Z5K2 1190 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 TRMT2AQ8IZ69 625 aaKnown RBP6.89□□□□□ -1.31
BRCA1-224ENST00000497488 LZTR1Q8N653 840 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 PIWIL2Q8TC59 973 aaKnown RBP6.89□□□□□ -1.31
BRCA1-224ENST00000497488 SSH3Q8TE77 659 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 AFAP1L1Q8TED9 768 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 IRF7Q92985 503 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 ZUFSPQ96AP4 578 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 NMD3Q96D46 503 aaKnown RBP6.89□□□□□ -1.31
BRCA1-224ENST00000497488 EID2BQ96D98 161 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 ASIC4Q96FT7 647 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 MRGPRX1Q96LB2 322 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 SAMD11Q96NU1 681 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 CDADC1Q9BWV3 514 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 KCND1Q9NSA2 647 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-224ENST00000497488 VPS28Q9UK41 221 aa6.89□□□□□ -1.31
BRCA1-224ENST00000497488 NSFL1CQ9UNZ2 370 aaKnown RBP6.89□□□□□ -1.31
BRCA1-224ENST00000497488 COA3Q9Y2R0 106 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-224ENST00000497488 DNMBPQ6XZF7 1577 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 SGTAO43765 313 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 ANXA2P07355 339 aaKnown RBP6.88□□□□□ -1.31
BRCA1-224ENST00000497488 RARBP10826 455 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 MYL4P12829 197 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 MC4RP32245 332 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 EPHA5P54756 1037 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 PCBP3P57721 371 aaKnown RBP6.88□□□□□ -1.31
BRCA1-224ENST00000497488 RPS16P62249 146 aaKnown RBP6.88□□□□□ -1.31
BRCA1-224ENST00000497488 UBE3AQ05086 875 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 ADCY2Q08462 1091 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 GAS6Q14393 721 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 BORAQ6PGQ7 559 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 CILP2Q8IUL8 1156 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms