RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 TTLL5Q6EMB2 1281 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 SWSAP1Q6NVH7 229 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 OGFOD3Q6PK18 319 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 NPNTQ6UXI9 565 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 CYP26C1Q6V0L0 522 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 ARHGAP36Q6ZRI8 547 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 TTLL7Q6ZT98 887 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 MAEAQ7L5Y9 396 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 NBPF11Q86T75 865 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 RTN4RL1Q86UN2 441 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 OSTM1Q86WC4 334 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 ZNF354CQ86Y25 554 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 MYLK4Q86YV6 388 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PHYKPLQ8IUZ5 450 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 MFSD4AQ8N468 514 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 RNF152Q8N8N0 203 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 NAXEQ8NCW5 288 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PPHLN1Q8NEY8 458 aaKnown RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PHOSPHO1Q8TCT1 267 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 WHAMMQ8TF30 809 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 TSPEARQ8WU66 669 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 AUTS2Q8WXX7 1259 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 SKA1Q96BD8 255 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 ARL8AQ96BM9 186 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 APIPQ96GX9 242 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 FCRL2Q96LA5 508 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PAGR1Q9BTK6 254 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 B3GNT5Q9BYG0 378 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PITHD1Q9GZP4 211 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 HAPLN2Q9GZV7 340 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 SSU72Q9NP77 194 aaKnown RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 CATSPERZQ9NTU4 200 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 DNAJC28Q9NX36 388 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 ERVK13-1Q9NX77 482 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 C9orf78Q9NZ63 289 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 DENND2AQ9ULE3 1009 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 MINPP1Q9UNW1 487 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PCDHA2Q9Y5H9 948 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 CFAP20Q9Y6A4 193 aaKnown RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 MYO9AB2RTY4 2548 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 TEX15Q9BXT5 2789 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 FER1L6Q2WGJ9 1857 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PALLDQ8WX93 1383 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 SPTAN1Q13813 2472 aaKnown RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 COL2A1P02458 1487 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 SPTA1P02549 2419 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 CEP250Q9BV73 2442 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 ITIH6Q6UXX5 1313 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 FBN3Q75N90 2809 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 SPEGQ15772 3267 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 hCG_1642624A0A1W2PR95 340 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 ISM1B1AKI9 464 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 MYO1FO00160 1098 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 PIK3R2O00459 728 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 ELL2O00472 640 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 DDX3XO00571 662 aaKnown RBP eCLIP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 HTRA2O43464 458 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 SGTAO43765 313 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 NPHS1O60500 1241 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 HIP1RO75146 1068 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 THP07101 528 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 CELA2BP08218 269 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 NFICP08651 508 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 PTX3P26022 381 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 PEX2P28328 305 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 PPM1AP35813 382 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 BCL6P41182 706 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 MAGEA10P43363 369 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 CLCN7P51798 805 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 SLC16A1P53985 500 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 SRSF2Q01130 221 aaKnown RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 DSC2Q02487 901 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 TEKQ02763 1124 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 PPFIA1Q13136 1202 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 CNN3Q15417 329 aaKnown RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 CPSF6Q16630 551 aaKnown RBP eCLIP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 PITRM1Q5JRX3 1037 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 RNF220Q5VTB9 566 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 JAKMIP3Q5VZ66 844 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 CCDC174Q6PII3 467 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 ESPNLQ6ZVH7 1005 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 TMPRSS7Q7RTY8 843 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 SIAH1Q8IUQ4 282 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 FAM20CQ8IXL6 584 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 ARMC10Q8N2F6 343 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 TOP6BLQ8N6T0 577 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 ACRBPQ8NEB7 543 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 PPP1R35Q8TAP8 253 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 NSUN6Q8TEA1 469 aaKnown RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 LRTOMTQ8WZ04 291 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 TMEM41AQ96HV5 264 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 PAWRQ96IZ0 340 aaKnown RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 LRGUKQ96M69 825 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 RIPOR3Q96MK2 946 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 SCLT1Q96NL6 688 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 FOXB1Q99853 325 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 CRB3Q9BUF7 120 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 TTLL2Q9BWV7 592 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 TMEM120AQ9BXJ8 343 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms