RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 KIF2CQ99661 725 aa18.93■□□□□ 0.62
SMC4-226ENST00000497311 SMOC2Q9H3U7 446 aa18.93■□□□□ 0.62
SMC4-226ENST00000497311 SNTG2Q9NY99 539 aa18.93■□□□□ 0.62
SMC4-226ENST00000497311 STK24Q9Y6E0 443 aa18.93■□□□□ 0.62
SMC4-226ENST00000497311 C2orf16Q68DN1 1984 aa18.93■□□□□ 0.62
SMC4-226ENST00000497311 KMT2EQ8IZD2 1858 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 C1RP00736 705 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 U2AF2P26368 475 aaKnown RBP eCLIP18.92■□□□□ 0.623e-7■□□□□ 11.2
SMC4-226ENST00000497311 TCF15Q12870 199 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 TUSC3Q13454 348 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 PDIA5Q14554 519 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 HSP90AA2PQ14568 343 aaPredicted RBP18.92■□□□□ 0.62
SMC4-226ENST00000497311 PALB2Q86YC2 1186 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 RIN2Q8WYP3 895 aaPredicted RBP18.92■□□□□ 0.62
SMC4-226ENST00000497311 RAB34Q9BZG1 259 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 CCDC113Q9H0I3 377 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 BHMT2Q9H2M3 363 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 PLEKHA4Q9H4M7 779 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 FNIP2Q9P278 1114 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 KIAA1024Q9UPX6 916 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 PLXNA3P51805 1871 aa18.92■□□□□ 0.62
SMC4-226ENST00000497311 RECQL4O94761 1208 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 THP07101 528 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 SPATA31D3P0C874 917 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 MYBP10242 640 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 EFNA5P52803 228 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 CREMQ03060 361 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 SPATA31D4Q6ZUB0 917 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 STAMQ92783 540 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 KIFAP3Q92845 792 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 PAAF1Q9BRP4 392 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 RHOBTB2Q9BYZ6 727 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 POLD4Q9HCU8 107 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 DDX19AQ9NUU7 478 aaKnown RBP18.91■□□□□ 0.62
SMC4-226ENST00000497311 CACNG4Q9UBN1 327 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 DAXXQ9UER7 740 aaPredicted RBP18.91■□□□□ 0.62
SMC4-226ENST00000497311 USP20Q9Y2K6 914 aa18.91■□□□□ 0.62
SMC4-226ENST00000497311 SF3B1O75533 1304 aaKnown RBP eCLIP18.91■□□□□ 0.62
SMC4-226ENST00000497311 CASTOR2A6NHX0 329 aa18.9■□□□□ 0.62
SMC4-226ENST00000497311 PTGESO14684 152 aa18.9■□□□□ 0.62
SMC4-226ENST00000497311 TGM5O43548 720 aa18.9■□□□□ 0.62
SMC4-226ENST00000497311 RFPL2O75678 378 aa18.9■□□□□ 0.62
SMC4-226ENST00000497311 NUBP1P53384 320 aa18.9■□□□□ 0.62
SMC4-226ENST00000497311 PTGDRQ13258 359 aa18.9■□□□□ 0.62
SMC4-226ENST00000497311 GLYCTKQ8IVS8 523 aa18.9■□□□□ 0.62
SMC4-226ENST00000497311 IGSF22Q8N9C0 903 aa18.9■□□□□ 0.62
SMC4-226ENST00000497311 SNX29Q8TEQ0 813 aa18.9■□□□□ 0.62
SMC4-226ENST00000497311 SMG7Q92540 1137 aaKnown RBP18.9■□□□□ 0.62
SMC4-226ENST00000497311 KIFC3Q9BVG8 833 aa18.9■□□□□ 0.62
SMC4-226ENST00000497311 WDR6Q9NNW5 1121 aaKnown RBP18.9■□□□□ 0.62
SMC4-226ENST00000497311 PCDHB6Q9Y5E3 794 aa18.9■□□□□ 0.62
SMC4-226ENST00000497311 EDN1P05305 212 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 RPL17P18621 184 aaKnown RBP18.89■□□□□ 0.61
SMC4-226ENST00000497311 GBP2P32456 591 aaPredicted RBP18.89■□□□□ 0.61
SMC4-226ENST00000497311 TOB1P50616 345 aaPredicted RBP18.89■□□□□ 0.61
SMC4-226ENST00000497311 TDGQ13569 410 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 DCAF4L1Q3SXM0 396 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 C8orf34Q49A92 452 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 EEF1DP3Q658K8 133 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 LILRA6Q6PI73 481 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 HASPINQ8TF76 798 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 PHOX2BQ99453 314 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 NT5C3AQ9H0P0 336 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 IRF2BPLQ9H1B7 796 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 MFSD1Q9H3U5 465 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 KCNK12Q9HB15 430 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 PIDD1Q9HB75 910 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 GDAQ9Y2T3 454 aa18.89■□□□□ 0.61
SMC4-226ENST00000497311 MTCL1Q9Y4B5 1905 aaKnown RBP18.89■□□□□ 0.61
SMC4-226ENST00000497311 K7ERI5 159 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 LAD1O00515 517 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 KIF4AO95239 1232 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 ATF7IP2Q5U623 682 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 FAM171A1Q5VUB5 890 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 KRT79Q5XKE5 535 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 PRSS55Q6UWB4 352 aaPredicted RBP18.88■□□□□ 0.61
SMC4-226ENST00000497311 APBB1IPQ7Z5R6 666 aaPredicted RBP18.88■□□□□ 0.61
SMC4-226ENST00000497311 CEP57Q86XR8 500 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 TTPALQ9BTX7 342 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 ZDHHC7Q9NXF8 308 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 IGSF9Q9P2J2 1179 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 DNM3Q9UQ16 869 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 KIF3AQ9Y496 699 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 CLUHO75153 1309 aa18.88■□□□□ 0.61
SMC4-226ENST00000497311 E9PMD0 336 aa18.87■□□□□ 0.61
SMC4-226ENST00000497311 N4BP1O75113 896 aaKnown RBP18.87■□□□□ 0.61
SMC4-226ENST00000497311 CACNA1HO95180 2353 aa18.87■□□□□ 0.61
SMC4-226ENST00000497311 PAPLNO95428 1278 aa18.87■□□□□ 0.61
SMC4-226ENST00000497311 ELAVL2Q12926 359 aaKnown RBP18.87■□□□□ 0.61
SMC4-226ENST00000497311 NAB2Q15742 525 aa18.87■□□□□ 0.61
SMC4-226ENST00000497311 RTP2Q5QGT7 225 aa18.87■□□□□ 0.61
SMC4-226ENST00000497311 NT5DC1Q5TFE4 455 aa18.87■□□□□ 0.61
SMC4-226ENST00000497311 PIK3R5Q8WYR1 880 aa18.87■□□□□ 0.61
SMC4-226ENST00000497311 ZNF707Q96C28 371 aaPredicted RBP18.87■□□□□ 0.61
SMC4-226ENST00000497311 PRKD2Q9BZL6 878 aa18.87■□□□□ 0.61
SMC4-226ENST00000497311 CXCL16Q9H2A7 254 aa18.87■□□□□ 0.61
SMC4-226ENST00000497311 CCDC169A6NNP5 214 aa18.86■□□□□ 0.61
SMC4-226ENST00000497311 PRPHP41219 470 aa18.86■□□□□ 0.61
SMC4-226ENST00000497311 PEX3P56589 373 aa18.86■□□□□ 0.61
SMC4-226ENST00000497311 RABEP1Q15276 862 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms