RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 ADSSL1Q8N142 457 aa17.27■□□□□ 0.36
PMF1-205ENST00000497069 ZNF689Q96CS4 500 aaPredicted RBP17.27■□□□□ 0.36
PMF1-205ENST00000497069 CBWD1Q9BRT8 395 aa17.27■□□□□ 0.36
PMF1-205ENST00000497069 MRPL9Q9BYD2 267 aaKnown RBP17.27■□□□□ 0.36
PMF1-205ENST00000497069 KCTD10Q9H3F6 313 aa17.27■□□□□ 0.36
PMF1-205ENST00000497069 TMEM63CQ9P1W3 806 aa17.27■□□□□ 0.36
PMF1-205ENST00000497069 RANBP2P49792 3224 aaKnown RBP17.26■□□□□ 0.35
PMF1-205ENST00000497069 MEIS3P2A8K0S8 358 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 OFD1O75665 1012 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 MLH1P40692 756 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 GATMP50440 423 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 CYP2J2P51589 502 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 RNASELQ05823 741 aaKnown RBP17.26■□□□□ 0.35
PMF1-205ENST00000497069 NOMO2Q5JPE7 1267 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 CLLU1OSQ5K130 101 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 CMTR2Q8IYT2 770 aaKnown RBP17.26■□□□□ 0.35
PMF1-205ENST00000497069 GPD1LQ8N335 351 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 FIBCD1Q8N539 461 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 SAAL1Q96ER3 474 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 DHTKD1Q96HY7 919 aaPredicted RBP17.26■□□□□ 0.35
PMF1-205ENST00000497069 CASD1Q96PB1 797 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 GAD1Q99259 594 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 FAM213AQ9BRX8 229 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 RPF1Q9H9Y2 349 aaKnown RBP17.26■□□□□ 0.35
PMF1-205ENST00000497069 KIAA1586Q9HCI6 787 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 HSPBP1Q9NZL4 362 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 KLK14Q9P0G3 267 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 KANSL3Q9P2N6 904 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 DACH1Q9UI36 760 aa17.26■□□□□ 0.35
PMF1-205ENST00000497069 ARL5CA6NH57 179 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 TULP1O00294 542 aaPredicted RBP17.25■□□□□ 0.35
PMF1-205ENST00000497069 EXTL3O43909 919 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 LETM1O95202 739 aaPredicted RBP17.25■□□□□ 0.35
PMF1-205ENST00000497069 BMP6P22004 513 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 ACOT2P49753 483 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 NLRP12P59046 1061 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 SPOUT1Q5T280 376 aaKnown RBP17.25■□□□□ 0.35
PMF1-205ENST00000497069 KLHL10Q6JEL2 608 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 RBM43Q6ZSC3 357 aaKnown RBP17.25■□□□□ 0.35
PMF1-205ENST00000497069 C12orf56Q8IXR9 622 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 TMEM192Q8IY95 271 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 LRRC43Q8N309 656 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 MLKLQ8NB16 471 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 XXYLT1Q8NBI6 393 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 FAM212AQ96EL1 285 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 ZFP42Q96MM3 310 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 PBX4Q9BYU1 374 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 RNF19AQ9NV58 838 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 CPSF3Q9UKF6 684 aaKnown RBP17.25■□□□□ 0.35
PMF1-205ENST00000497069 TRAF3IP3Q9Y228 551 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 TTC3P53804 2025 aa17.25■□□□□ 0.35
PMF1-205ENST00000497069 GOLGA8IPA6NC78 632 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 GOLGA8JA6NMD2 632 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 EXOC3O60645 756 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 POMCP01189 267 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 RPL13P26373 211 aaKnown RBP17.24■□□□□ 0.35
PMF1-205ENST00000497069 PBX2P40425 430 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 TNFSF9P41273 254 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 SCNN1GP51170 649 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 LRRC63Q05C16 580 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 PPP2R3AQ06190 1150 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 CENPPQ6IPU0 288 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 SP7Q8TDD2 431 aaPredicted RBP17.24■□□□□ 0.35
PMF1-205ENST00000497069 P2RX5Q93086 422 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 SNX27Q96L92 541 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 FAM193BQ96PV7 902 aaPredicted RBP17.24■□□□□ 0.35
PMF1-205ENST00000497069 SEMA6BQ9H3T3 888 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 PLEKHA5Q9HAU0 1116 aa17.24■□□□□ 0.35
PMF1-205ENST00000497069 RC3H2Q9HBD1 1191 aaKnown RBP17.24■□□□□ 0.35
PMF1-205ENST00000497069 BICDL2A1A5D9 508 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 ZNF233A6NK53 670 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 PPP1R3GB7ZBB8 358 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 FAM189A1O60320 539 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 NR3C1P04150 777 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 CA3P07451 260 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 CXCL8P10145 99 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 MYOGP15173 224 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 CD44P16070 742 aaKnown RBP17.23■□□□□ 0.35
PMF1-205ENST00000497069 NR2F2P24468 414 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 CCNE1P24864 410 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 DNAJB2P25686 324 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 POU5F1Q01860 360 aaKnown RBP17.23■□□□□ 0.35
PMF1-205ENST00000497069 PAK1Q13153 545 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 MYBPC2Q14324 1141 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 ENOX2Q16206 610 aaKnown RBP17.23■□□□□ 0.35
PMF1-205ENST00000497069 ZBTB41Q5SVQ8 909 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 SLC9A9Q8IVB4 645 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 CD302Q8IX05 232 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 NELFBQ8WX92 580 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 TIFAQ96CG3 184 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 NKX2-4Q9H2Z4 354 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 SLC28A3Q9HAS3 691 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 RBAKQ9NYW8 714 aaPredicted RBP17.23■□□□□ 0.35
PMF1-205ENST00000497069 CTNND2Q9UQB3 1225 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 FRMD4BQ9Y2L6 1034 aa17.23■□□□□ 0.35
PMF1-205ENST00000497069 YBX2Q9Y2T7 364 aaKnown RBP17.23■□□□□ 0.35
PMF1-205ENST00000497069 LCHNA4D1U4 455 aa17.22■□□□□ 0.35
PMF1-205ENST00000497069 INPPL1O15357 1258 aa17.22■□□□□ 0.35
PMF1-205ENST00000497069 IL18RAPO95256 599 aa17.22■□□□□ 0.35
PMF1-205ENST00000497069 THP07101 528 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms