RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 NCOA5Q9HCD5 579 aaKnown RBP3.56□□□□□ -1.84
SHTN1-206ENST00000497044 DPP7Q9UHL4 492 aa3.56□□□□□ -1.84
SHTN1-206ENST00000497044 SORCS3Q9UPU3 1222 aa3.56□□□□□ -1.84
SHTN1-206ENST00000497044 SSX2IPQ9Y2D8 614 aa3.56□□□□□ -1.84
SHTN1-206ENST00000497044 GREB1Q4ZG55 1949 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 MIA3Q5JRA6 1907 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 GPAA1O43292 621 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 XRCC6P12956 609 aaKnown RBP eCLIP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 AOC1P19801 751 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 LTBRP36941 435 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 FAM189BP81408 668 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 HNRNPDQ14103 355 aaKnown RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 MCMDC2Q4G0Z9 681 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 ZNF385CQ66K41 422 aaPredicted RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 ELMSAN1Q6PJG2 1045 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 RBM43Q6ZSC3 357 aaKnown RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 RAB44Q7Z6P3 723 aaPredicted RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 CBARPQ8N350 705 aaPredicted RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 KREMEN2Q8NCW0 462 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 PLPPR2Q96GM1 343 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 FAM46AQ96IP4 442 aaKnown RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 CTAGE1Q96RT6 745 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 DSCC1Q9BVC3 393 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 NAPBQ9H115 298 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 NGRNQ9NPE2 291 aaKnown RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 NUP210Q8TEM1 1887 aaPredicted RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 ADGRA3Q8IWK6 1321 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 GH1P01241 217 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 TDO2P48775 406 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 DYNLL1P63167 89 aaKnown RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 ADGRA1Q86SQ6 560 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 ZNF444Q8N0Y2 327 aaPredicted RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 LCORLQ8N3X6 602 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 VN1R2Q8NFZ6 395 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 SECISBP2LQ93073 1101 aaKnown RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 MRPL4Q9BYD3 311 aaKnown RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 KLHL25Q9H0H3 589 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 PRDM5Q9NQX1 630 aaPredicted RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 SH2B1Q9NRF2 756 aaPredicted RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 SUCOQ9UBS9 1254 aaKnown RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 ZNF318Q5VUA4 2279 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 CCDC171Q6TFL3 1326 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 TNRC6BQ9UPQ9 1833 aaKnown RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 ANKRD62A6NC57 917 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 EPOPA6NHQ4 379 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 TULP2O00295 520 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 SLC30A4O14863 429 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 PLD2O14939 933 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 DNAJC8O75937 253 aaPredicted RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 STAG3L1P0CL83 205 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 PLCD1P51178 756 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 KCNQ1P51787 676 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 CDC42EP1Q00587 391 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 PRKCQQ04759 706 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 ICA1Q05084 483 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 PCBP1Q15365 356 aaKnown RBP eCLIP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 FXNQ16595 210 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 NFE2Q16621 373 aaPredicted RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 TAF2Q6P1X5 1199 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 CASC1Q6TDU7 716 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 CHSY3Q70JA7 882 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 VWA5B2Q8N398 1253 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 MIGA1Q8NAN2 632 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 NKD2Q969F2 451 aaPredicted RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 ARMT1Q9H993 441 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 METTL14Q9HCE5 456 aaKnown RBP3.55□□□□□ -1.84
SHTN1-206ENST00000497044 COL4A3BPQ9Y5P4 624 aa3.55□□□□□ -1.84
SHTN1-206ENST00000497044 ANK1P16157 1881 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 MBLAC1A4D2B0 266 aaPredicted RBP3.54□□□□□ -1.84
SHTN1-206ENST00000497044 B2RBV5 119 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 STXBP3O00186 592 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 SUSD5O60279 629 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 EFEMP2O95967 443 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 PPM1AP35813 382 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 STARD6P59095 220 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 HYAL1Q12794 435 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 EPC2Q52LR7 807 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 ANKRD54Q6NXT1 300 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 CTR9Q6PD62 1173 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 KRT25Q7Z3Z0 450 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 C11orf74Q86VG3 221 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 WFDC3Q8IUB2 231 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 IFNL3Q8IZI9 196 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 ARHGEF39Q8N4T4 335 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 MTMR8Q96EF0 704 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 MRFAP1L1Q96HT8 127 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 NSUN5Q96P11 429 aaKnown RBP3.54□□□□□ -1.84
SHTN1-206ENST00000497044 NELL2Q99435 816 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 SMG9Q9H0W8 520 aaKnown RBP3.54□□□□□ -1.84
SHTN1-206ENST00000497044 MIR1-1HGQ9H1L0 117 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 MKNK2Q9HBH9 465 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 DIAPH3Q9NSV4 1193 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 CYP39A1Q9NYL5 469 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 PALD1Q9ULE6 856 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 DUSP12Q9UNI6 340 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 PLAAQ9Y263 795 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 ZDHHC9Q9Y397 364 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 SLC12A7Q9Y666 1083 aa3.54□□□□□ -1.84
SHTN1-206ENST00000497044 BAZ2AQ9UIF9 1905 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms