RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 CNPPD1Q9BV87 410 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 TMPRSS13Q9BYE2 586 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 TXLNGYQ9BZA5 131 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 XPO4Q9C0E2 1151 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 ARHGAP39Q9C0H5 1083 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 DHX36Q9H2U1 1008 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 PCIF1Q9H4Z3 704 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 SP110Q9HB58 689 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 TMEM8AQ9HCN3 771 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 ATP13A2Q9NQ11 1180 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CHST7Q9NS84 486 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 RAD18Q9NS91 495 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CATSPERZQ9NTU4 200 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 MRGBPQ9NV56 204 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 COL20A1Q9P218 1284 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 LRFN1Q9P244 771 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 IGSF9Q9P2J2 1179 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 ORC3Q9UBD5 711 aaPredicted RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 STAP2Q9UGK3 403 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 ITGB1BP2Q9UKP3 347 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 MAGED2Q9UNF1 606 aaPredicted RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 SIK3Q9Y2K2 1263 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PCDHA2Q9Y5H9 948 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 SNX13Q9Y5W8 968 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 EP400Q96L91 3159 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PDE4DIPQ5VU43 2346 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 ARHGEF28Q8N1W1 1705 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 MARF1Q9Y4F3 1742 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 REREQ9P2R6 1566 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CNTNAP4Q9C0A0 1308 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 CASZ1Q86V15 1759 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 ATP7AQ04656 1500 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 MAP3K1Q13233 1512 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.18□□□□□ -2.065e-6■□□□□ 9.5
UBR4-217ENST00000497018 FAM135AQ9P2D6 1515 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 ELOA3CA0A087WX78 387 aaPredicted RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 PI4KAP2A4QPH2 592 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 LRRC14BA6NHZ5 514 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 ELOA3DA6NLF2 546 aaPredicted RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 SMTNL1A8MU46 457 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 SCDO00767 359 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 NRG2O14511 850 aaPredicted RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 NKRFO15226 690 aaKnown RBP eCLIP2.18□□□□□ -2.06
UBR4-217ENST00000497018 SLC16A6O15403 523 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 FGF10O15520 208 aaPredicted RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 LILRB5O75023 590 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 PTP4A3O75365 173 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 TNFRSF6BO95407 300 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 TIAF1O95411 115 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 ALBP02768 609 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 FTLP02792 175 aaPredicted RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 LPLP06858 475 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 PFKMP08237 780 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 JUPP14923 745 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 KRT15P19012 456 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 EN2P19622 333 aaPredicted RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 MC4RP32245 332 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 BMP8BP34820 402 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 ETV3P41162 512 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 PIK3CAP42336 1068 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 NPTX2P47972 431 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 CTCFP49711 727 aaPredicted RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 ARFIP2P53365 341 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 CLNS1AP54105 237 aaKnown RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 NAP1L1P55209 391 aaKnown RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 BCAR1P56945 870 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 PPP3CAQ08209 521 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 MALLQ13021 153 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 NOGQ13253 232 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 GRM1Q13255 1194 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 NMIQ13287 307 aaPredicted RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 LSAMPQ13449 338 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 IL10RAQ13651 578 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 BECN1Q14457 450 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 KRT32Q14532 448 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 UBE3CQ15386 1083 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 EZH2Q15910 746 aaKnown RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 ADRM1Q16186 407 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 CNGA2Q16280 664 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 ARL13BQ3SXY8 428 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 ELOA3BQ3SY89 546 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 PAN2Q504Q3 1202 aaKnown RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 UBXN11Q5T124 520 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 EEF1DP3Q658K8 133 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 SLC30A6Q6NXT4 461 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 GGT6Q6P531 493 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 TMCO3Q6UWJ1 677 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 ARHGAP36Q6ZRI8 547 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 ESPNLQ6ZVH7 1005 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 BBS12Q6ZW61 710 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 KANSL1Q7Z3B3 1105 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 WFDC8Q8IUA0 241 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 RIOX2Q8IUF8 465 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 KSR1Q8IVT5 923 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 FTSJ3Q8IY81 847 aaKnown RBP2.18□□□□□ -2.06
UBR4-217ENST00000497018 ADGRG2Q8IZP9 1017 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 OXR1Q8N573 874 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 CCDC33Q8N5R6 958 aa2.18□□□□□ -2.06
UBR4-217ENST00000497018 LZTR1Q8N653 840 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms