RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 GLRA2P23416 452 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 RFC5P40937 340 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 ERVK-9P63128 1117 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 CDR2Q01850 454 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 GCNT1Q02742 428 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 CUL1Q13616 776 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 PSMD6Q15008 389 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 CLUL1Q15846 466 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 C15orf39Q6ZRI6 1047 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 NCAPG2Q86XI2 1143 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 SULF1Q8IWU6 871 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 DEPTORQ8TB45 409 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 DCPSQ96C86 337 aaKnown RBP14.04□□□□□ -0.16
GARNL3-220ENST00000496711 RNPC3Q96LT9 517 aaKnown RBP14.04□□□□□ -0.16
GARNL3-220ENST00000496711 NAP1L3Q99457 506 aaPredicted RBP14.04□□□□□ -0.16
GARNL3-220ENST00000496711 SH3GL2Q99962 352 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 C1orf112Q9NSG2 853 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 STYXL1Q9Y6J8 313 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 SOWAHBA6NEL2 793 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 LRRIQ4A6NIV6 560 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 BHMG1C9JSJ3 638 aaPredicted RBP14.04□□□□□ -0.16
GARNL3-220ENST00000496711 GOLGA8KD6RF30 607 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 DDNO94850 711 aaPredicted RBP14.04□□□□□ -0.16
GARNL3-220ENST00000496711 FAM153BP0C7A2 387 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 ITGA4P13612 1032 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 ARL2P36404 184 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 IREB2P48200 963 aaKnown RBP14.04□□□□□ -0.16
GARNL3-220ENST00000496711 CLDN10P78369 228 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 IRX3P78415 501 aaPredicted RBP14.04□□□□□ -0.16
GARNL3-220ENST00000496711 FAM153CQ494X1 144 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 FAM160B1Q5W0V3 765 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 DLK2Q6UY11 383 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 PSPC1Q8WXF1 523 aaKnown RBP14.04□□□□□ -0.16
GARNL3-220ENST00000496711 CEP89Q96ST8 783 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 ACP6Q9NPH0 428 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 FAM153AQ9UHL3 310 aa14.04□□□□□ -0.16
GARNL3-220ENST00000496711 MCM3APO60318 1980 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 A0A0G2JLL6 359 aaPredicted RBP14.03□□□□□ -0.16
GARNL3-220ENST00000496711 GSTTP1A0A1W2PQM5 241 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 NEDD9Q14511 834 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 SLFN12LQ6IEE8 588 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 PRRT2Q7Z6L0 340 aaPredicted RBP14.03□□□□□ -0.16
GARNL3-220ENST00000496711 UBL4BQ8N7F7 174 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 CCDC26Q8TAB7 109 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 MORC4Q8TE76 937 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 DHX38Q92620 1227 aaKnown RBP14.03□□□□□ -0.16
GARNL3-220ENST00000496711 TATDN2Q93075 761 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 FNBP1Q96RU3 617 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 ELP3Q9H9T3 547 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 GTF3C4Q9UKN8 822 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 AGO2Q9UKV8 859 aaKnown RBP14.03□□□□□ -0.16
GARNL3-220ENST00000496711 ALG6Q9Y672 507 aa14.03□□□□□ -0.16
GARNL3-220ENST00000496711 GOLGA6L10A0A0M3HER8 536 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 ATMINO43313 823 aaPredicted RBP14.02□□□□□ -0.16
GARNL3-220ENST00000496711 KRT5P13647 590 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 GUCY2FP51841 1108 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 NLRP11P59045 1033 aaKnown RBP14.02□□□□□ -0.16
GARNL3-220ENST00000496711 HLTFQ14527 1009 aaKnown RBP eCLIP14.02□□□□□ -0.16
GARNL3-220ENST00000496711 PPP2R5EQ16537 467 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 MAATS1Q7Z4T9 603 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 DDX1Q92499 740 aaKnown RBP14.02□□□□□ -0.16
GARNL3-220ENST00000496711 ALG3Q92685 438 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 ZNF653Q96CK0 615 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 OTUD5Q96G74 571 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 RPS6KC1Q96S38 1066 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 PCYT2Q99447 389 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 ZSWIM1Q9BR11 485 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 PAGR1Q9BTK6 254 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 PI4K2AQ9BTU6 479 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 NRBP2Q9NSY0 501 aa14.02□□□□□ -0.16
GARNL3-220ENST00000496711 GOLGA6CA6NDK9 693 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 TMEM110-MUSTN1A8MSY1 372 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 K7ERI5 159 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 IRF6O14896 467 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 LDHAP00338 332 aaKnown RBP14.01□□□□□ -0.17
GARNL3-220ENST00000496711 CYP1A2P05177 515 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 GOLGA6DP0CG33 693 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 CAPN2P17655 700 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 TNNI1P19237 187 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ECHS1P30084 290 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 PIK3CAP42336 1068 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 PTENP60484 403 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 PPFIA1Q13136 1202 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 TRADDQ15628 312 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 TARBP2Q15633 366 aaKnown RBP14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ZACNQ401N2 412 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 CFAP58Q5T655 872 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 FAM76AQ8TAV0 307 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ZNF564Q8TBZ8 553 aaPredicted RBP14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ZNF516Q92618 1163 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ZIM3Q96PE6 472 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 NUP85Q9BW27 656 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 GOLGA6AQ9NYA3 693 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 AMACRQ9UHK6 382 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 GGPS1O95749 300 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 HLA-DRAP01903 254 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 TGFB3P10600 412 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 TCF7P36402 384 aaPredicted RBP14.01□□□□□ -0.17
GARNL3-220ENST00000496711 HSPA9P38646 679 aaKnown RBP14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ACOT2P49753 483 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms