RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 IMPACTQ9P2X3 320 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 PVALEFA0A1B0GWK0 134 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 A0A1W2PPC1 479 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 TBX3O15119 743 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 MTA2O94776 668 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 RHOQP17081 205 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 RFX1P22670 979 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 CASP4P49662 377 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 ADCY1Q08828 1119 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 NCBP1Q09161 790 aaKnown RBP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 SYCP1Q15431 976 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 SMUG1Q53HV7 270 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 HYIQ5T013 277 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 CCDC80Q76M96 950 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 SYT2Q8N9I0 419 aaPredicted RBP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 ERMNQ8TAM6 284 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 DHTKD1Q96HY7 919 aaPredicted RBP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 PPP1R13BQ96KQ4 1090 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 KIFC3Q9BVG8 833 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 NOC4LQ9BVI4 516 aaKnown RBP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 CAPS2Q9BXY5 557 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 TSGA10Q9BZW7 698 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 MRPL44Q9H9J2 332 aaKnown RBP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 KIF9Q9HAQ2 790 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 LZTFL1Q9NQ48 299 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 COMMD8Q9NX08 183 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 FAM53CQ9NYF3 392 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 CYP39A1Q9NYL5 469 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 LIMA1Q9UHB6 759 aaKnown RBP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 RAPGEFL1Q9UHV5 662 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 ATP8A1Q9Y2Q0 1164 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 SLC45A1Q9Y2W3 748 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 KDM3AQ9Y4C1 1321 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 E2F6O75461 281 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 GCNT3O95395 438 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 TFRCP02786 760 aaKnown RBP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 KRT9P35527 623 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 CLK1P49759 484 aaKnown RBP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 ENOX2Q16206 610 aaKnown RBP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 COBLL1Q53SF7 1204 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 LRRC31Q6UY01 552 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 LRRC55Q6ZSA7 311 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 SEPT14Q6ZU15 432 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 HOOK3Q86VS8 718 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 PPFIBP1Q86W92 1011 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 MCF2L2Q86YR7 1114 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 LMNTD2Q8IXW0 634 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 ANKRD35Q8N283 1001 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 MYCT1Q8N699 235 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 MB21D1Q8N884 522 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 NOC3LQ8WTT2 800 aaKnown RBP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 OPTNQ96CV9 577 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 TEX13BQ9BXU2 312 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 MMRN2Q9H8L6 949 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 IFT122Q9HBG6 1241 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 AGO4Q9HCK5 861 aaKnown RBP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.68□□□□□ -1.34
SSBP1-213ENST00000496622 HCN4Q9Y3Q4 1203 aa6.68□□□□□ -1.34
SSBP1-213ENST00000496622 A6NJR5 290 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 AKR1B15C9JRZ8 316 aaPredicted RBP6.67□□□□□ -1.34
SSBP1-213ENST00000496622 USO1O60763 962 aaKnown RBP6.67□□□□□ -1.34
SSBP1-213ENST00000496622 CSPG5O95196 566 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 PLEKP08567 350 aaPredicted RBP6.67□□□□□ -1.34
SSBP1-213ENST00000496622 GCKP35557 465 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 CLCN2P51788 898 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 CDR1P51861 262 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 ERVK-24P63145 666 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 SFSWAPQ12872 951 aaKnown RBP6.67□□□□□ -1.34
SSBP1-213ENST00000496622 PPP2R5CQ13362 524 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 C10orf62Q5T681 223 aaPredicted RBP6.67□□□□□ -1.34
SSBP1-213ENST00000496622 GBP6Q6ZN66 633 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 C1orf186Q6ZWK4 172 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 MIER3Q7Z3K6 550 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 VSIG10LQ86VR7 867 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 DAW1Q8N136 415 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 GUF1Q8N442 669 aaKnown RBP6.67□□□□□ -1.34
SSBP1-213ENST00000496622 CHCHD4Q8N4Q1 142 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 CCDC150Q8NCX0 1101 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 ZSWIM2Q8NEG5 633 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 ZNF507Q8TCN5 953 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 CENPTQ96BT3 561 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 FAM84AQ96KN4 292 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 TEKT3Q9BXF9 490 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 TAF1DQ9H5J8 278 aaPredicted RBP6.67□□□□□ -1.34
SSBP1-213ENST00000496622 MAGEF1Q9HAY2 307 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 ADAMTS5Q9UNA0 930 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 GLTPD2A6NH11 291 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 LGALS16A8MUM7 142 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 C19orf81C9J6K1 198 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 MFAP3LO75121 409 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 LRRN2O75325 713 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 TRIM21P19474 475 aaKnown RBP6.67□□□□□ -1.34
SSBP1-213ENST00000496622 ADAM9Q13443 819 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 PTPN14Q15678 1187 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 ODR4Q5SWX8 454 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 PCNX4Q63HM2 1172 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 OLFML1Q6UWY5 402 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 B3GNT9Q6UX72 402 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 LRRN4CLQ8ND94 238 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 B4GALNT2Q8NHY0 566 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms