RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ADH1AP07327 375 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 CNPP09543 421 aaKnown RBP17.28■□□□□ 0.36
HDAC4-213ENST00000496347 PLA2G4BP0C869 781 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 PLS3P13797 630 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 UBA7P41226 1012 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 DSG1Q02413 1049 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 CREMQ03060 361 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 HSP90AA2PQ14568 343 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-213ENST00000496347 ZNF568Q3ZCX4 644 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 NT5DC1Q5TFE4 455 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 FUT10Q6P4F1 479 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 ELMSAN1Q6PJG2 1045 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 RNF135Q8IUD6 432 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 SNTG2Q9NY99 539 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 TECTAO75443 2155 aa17.28■□□□□ 0.36
HDAC4-213ENST00000496347 MTCL1Q9Y4B5 1905 aaKnown RBP17.27■□□□□ 0.36
HDAC4-213ENST00000496347 H0YCG3 227 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 BRD1O95696 1058 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 THP07101 528 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 EPCAMP16422 314 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 SCP2P22307 547 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 MTHFRP42898 656 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 CLCN4P51793 760 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 SMTNP53814 917 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 SF3A1Q15459 793 aaKnown RBP17.27■□□□□ 0.36
HDAC4-213ENST00000496347 KIAA1841Q6NSI8 718 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 KCNN1Q92952 543 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 RIPOR3Q96MK2 946 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 KLHL5Q96PQ7 755 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 NTPCRQ9BSD7 190 aaKnown RBP17.27■□□□□ 0.36
HDAC4-213ENST00000496347 POLD4Q9HCU8 107 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.27■□□□□ 0.36
HDAC4-213ENST00000496347 TOPORSQ9NS56 1045 aaPredicted RBP17.27■□□□□ 0.36
HDAC4-213ENST00000496347 DPP7Q9UHL4 492 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 ODF2LQ9ULJ1 636 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 NR2E1Q9Y466 385 aa17.27■□□□□ 0.36
HDAC4-213ENST00000496347 VWA8A3KMH1 1905 aa17.27■□□□□ 0.35
HDAC4-213ENST00000496347 ZNF318Q5VUA4 2279 aa17.27■□□□□ 0.35
HDAC4-213ENST00000496347 ZDBF2Q9HCK1 2354 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 PRR33A8MZF0 331 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 F8W810 466 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 C1RP00736 705 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 COL9A1P20849 921 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 SYT1P21579 422 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 PROZP22891 400 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 KLRC2P26717 231 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 GRM5P41594 1212 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 STRN3Q13033 797 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 USP41Q3LFD5 358 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 KIAA0319Q5VV43 1072 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 TAS1R3Q7RTX0 852 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 TMEM161BQ8NDZ6 487 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 RASSF8Q8NHQ8 419 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 FBXL18Q96ME1 805 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 PLIN2Q99541 437 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 ACO2Q99798 780 aaKnown RBP17.26■□□□□ 0.35
HDAC4-213ENST00000496347 LRFN3Q9BTN0 628 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 CCDC94Q9BW85 323 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-213ENST00000496347 CDT1Q9H211 546 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 RXFP1Q9HBX9 757 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 PTPRHQ9HD43 1115 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 CHST7Q9NS84 486 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 LARSQ9P2J5 1176 aaKnown RBP17.26■□□□□ 0.35
HDAC4-213ENST00000496347 MUTYHQ9UIF7 546 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 USP20Q9Y2K6 914 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 GDAQ9Y2T3 454 aa17.26■□□□□ 0.35
HDAC4-213ENST00000496347 FAM86C2PA6NEL3 165 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 CASTOR2A6NHX0 329 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 C2CD2LO14523 706 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 SLC16A4O15374 487 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 TEX28O15482 410 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 KIF4AO95239 1232 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 GLUD1P00367 558 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 MAPTP10636 758 aaKnown RBP17.25■□□□□ 0.35
HDAC4-213ENST00000496347 MCF2P10911 925 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 PLCG1P19174 1290 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 YARSP54577 528 aaKnown RBP17.25■□□□□ 0.35
HDAC4-213ENST00000496347 RAD51AP2Q09MP3 1159 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 ELAVL2Q12926 359 aaKnown RBP17.25■□□□□ 0.35
HDAC4-213ENST00000496347 RESTQ13127 1097 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 NAB2Q15742 525 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 RARS2Q5T160 578 aaKnown RBP17.25■□□□□ 0.35
HDAC4-213ENST00000496347 MPZL3Q6UWV2 235 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 RPGRIP1Q96KN7 1286 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 APOL5Q9BWW9 433 aa17.25■□□□□ 0.35
HDAC4-213ENST00000496347 MORC2Q9Y6X9 1032 aaPredicted RBP17.25■□□□□ 0.35
HDAC4-213ENST00000496347 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
HDAC4-213ENST00000496347 TMEM189-UBE2V1I3L0A0 370 aa17.24■□□□□ 0.35
HDAC4-213ENST00000496347 TOM1L1O75674 476 aa17.24■□□□□ 0.35
HDAC4-213ENST00000496347 NOLC1Q14978 699 aaKnown RBP eCLIP17.24■□□□□ 0.35
HDAC4-213ENST00000496347 PTPAQ15257 358 aa17.24■□□□□ 0.35
HDAC4-213ENST00000496347 ZPBP2Q6X784 338 aa17.24■□□□□ 0.35
HDAC4-213ENST00000496347 C15orf39Q6ZRI6 1047 aa17.24■□□□□ 0.35
HDAC4-213ENST00000496347 GPBP1Q86WP2 473 aa17.24■□□□□ 0.35
HDAC4-213ENST00000496347 CMASQ8NFW8 434 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-213ENST00000496347 RAD54LQ92698 747 aa17.24■□□□□ 0.35
HDAC4-213ENST00000496347 UROC1Q96N76 676 aa17.24■□□□□ 0.35
HDAC4-213ENST00000496347 PPP1R10Q96QC0 940 aaKnown RBP17.24■□□□□ 0.35
HDAC4-213ENST00000496347 REEP2Q9BRK0 252 aa17.24■□□□□ 0.35
HDAC4-213ENST00000496347 TARS2Q9BW92 718 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms