RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 DNAJB4Q9UDY4 337 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 KCNH3Q9ULD8 1083 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 TBX20Q9UMR3 447 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 MYMKA6NI61 221 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 POLR2DO15514 142 aaKnown RBP17.92■□□□□ 0.46
SF3A1-209ENST00000496189 DDHD2O94830 711 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 DNAJB1P25685 340 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 GRM5P41594 1212 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 HERC4Q5GLZ8 1057 aaPredicted RBP17.92■□□□□ 0.46
SF3A1-209ENST00000496189 PLPP4Q5VZY2 271 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 TAS1R3Q7RTX0 852 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 HVCN1Q96D96 273 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 ACAP3Q96P50 834 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 CDCA3Q99618 268 aaPredicted RBP17.92■□□□□ 0.46
SF3A1-209ENST00000496189 CDT1Q9H211 546 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 TLE6Q9H808 572 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 UBE2ZQ9H832 354 aaPredicted RBP17.92■□□□□ 0.46
SF3A1-209ENST00000496189 PRDM6Q9NQX0 595 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 CLDND1Q9NY35 253 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 USP25Q9UHP3 1055 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 EXOC7Q9UPT5 735 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 PLXNA4Q9HCM2 1894 aa17.92■□□□□ 0.46
SF3A1-209ENST00000496189 A0A087X0B3 334 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 NRP1O14786 923 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 EDN1P05305 212 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 NRIP1P48552 1158 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 OSTNP61366 133 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 TUSC3Q13454 348 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 ALCAMQ13740 583 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 TJAP1Q5JTD0 557 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 DDX53Q86TM3 631 aaKnown RBP17.91■□□□□ 0.46
SF3A1-209ENST00000496189 SFR1Q86XK3 245 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 COLGALT2Q8IYK4 626 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 VPS52Q8N1B4 723 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 KCNN1Q92952 543 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 PABPC5Q96DU9 382 aaKnown RBP17.91■□□□□ 0.46
SF3A1-209ENST00000496189 PANK4Q9NVE7 773 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 SSX2IPQ9Y2D8 614 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 PRG3Q9Y2Y8 225 aaPredicted RBP17.91■□□□□ 0.46
SF3A1-209ENST00000496189 PCDHB13Q9Y5F0 798 aa17.91■□□□□ 0.46
SF3A1-209ENST00000496189 TDRD15B5MCY1 1934 aaKnown RBP17.9■□□□□ 0.46
SF3A1-209ENST00000496189 NMT1P30419 496 aaKnown RBP17.9■□□□□ 0.46
SF3A1-209ENST00000496189 IRS1P35568 1242 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 AFF1P51825 1210 aaKnown RBP17.9■□□□□ 0.46
SF3A1-209ENST00000496189 ERVFC1P60507 584 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 ASIC1P78348 528 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 GTF2BQ00403 316 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 DSC1Q08554 894 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 CAMK1Q14012 370 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 RBM23Q86U06 439 aaKnown RBP17.9■□□□□ 0.46
SF3A1-209ENST00000496189 FSIP1Q8NA03 581 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 CCDC34Q96HJ3 373 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 ASB2Q96Q27 587 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 ST6GALNAC4Q9H4F1 302 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 PTPRHQ9HD43 1115 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 SLC38A7Q9NVC3 462 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 FAM50BQ9Y247 325 aa17.9■□□□□ 0.46
SF3A1-209ENST00000496189 A0A1B0GVL5 298 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 FSCN2O14926 492 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 GCNT3O95395 438 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 PFKFB1P16118 471 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 KCNA5P22460 613 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 PROZP22891 400 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 SYKP43405 635 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 NDUFV1P49821 464 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 MCL1Q07820 350 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 HYAL1Q12794 435 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 E2F4Q16254 413 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 PUS10Q3MIT2 529 aaKnown RBP17.89■□□□□ 0.45
SF3A1-209ENST00000496189 TPRNQ4KMQ1 711 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 SLFN12LQ6IEE8 588 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 KIAA1841Q6NSI8 718 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 MAP4K3Q8IVH8 894 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 DNAJC19Q96DA6 116 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 OLFML3Q9NRN5 406 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 KBTBD4Q9NVX7 518 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 MIOSQ9NXC5 875 aa17.89■□□□□ 0.45
SF3A1-209ENST00000496189 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.88■□□□□ 0.45
SF3A1-209ENST00000496189 TADA2AO75478 443 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 CXCL14O95715 111 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 PIGRP01833 764 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 URODP06132 367 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 CLTAP09496 248 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 POSTNQ15063 836 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 ZNF720Q7Z2F6 126 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 SYCP3Q8IZU3 236 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 EFHBQ8N7U6 833 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 STAMQ92783 540 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 UROC1Q96N76 676 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 ACCSQ96QU6 501 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 MSTO1Q9BUK6 570 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 TBC1D7Q9P0N9 293 aa17.88■□□□□ 0.45
SF3A1-209ENST00000496189 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.88■□□□□ 0.45
SF3A1-209ENST00000496189 EYSQ5T1H1 3165 aa17.87■□□□□ 0.45
SF3A1-209ENST00000496189 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.87■□□□□ 0.45
SF3A1-209ENST00000496189 FAM237AA0A1B0GTK4 181 aa17.87■□□□□ 0.45
SF3A1-209ENST00000496189 SOD2P04179 222 aa17.87■□□□□ 0.45
SF3A1-209ENST00000496189 SLFN14P0C7P3 912 aa17.87■□□□□ 0.45
SF3A1-209ENST00000496189 CTSAP10619 480 aa17.87■□□□□ 0.45
SF3A1-209ENST00000496189 TFF2Q03403 129 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms