RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 GRM5P41594 1212 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 MARSP56192 900 aaKnown RBP23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 TPM4P67936 248 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 KYAT1Q16773 422 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 TCP11X2Q5H9J9 407 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 FRMD5Q7Z6J6 570 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 LINC01599Q8WXQ3 324 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 BADQ92934 168 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 CNOT6LQ96LI5 555 aaKnown RBP23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 TSPYL2Q9H2G4 693 aaPredicted RBP23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 IPPQ9Y573 584 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 KCNJ18B7U540 433 aa23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 ENPP3O14638 875 aa23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 ZNF623O75123 536 aa23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 CLTAP09496 248 aa23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 SYN1P17600 705 aa23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 KCNJ12Q14500 433 aa23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 CCDC40Q4G0X9 1142 aa23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 RPUSD2Q8IZ73 545 aaKnown RBP23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 MFSD14AQ96MC6 490 aa23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 NXF3Q9H4D5 531 aaKnown RBP23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 MAGEC2Q9UBF1 373 aaPredicted RBP23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 ARMCX3Q9UH62 379 aaPredicted RBP23.72■■□□□ 1.39
ECHDC3-205ENST00000496136 EEF1GP26641 437 aaKnown RBP23.71■■□□□ 1.39
ECHDC3-205ENST00000496136 HSP90AA2PQ14568 343 aaPredicted RBP23.71■■□□□ 1.39
ECHDC3-205ENST00000496136 SLC24A5Q71RS6 500 aa23.71■■□□□ 1.39
ECHDC3-205ENST00000496136 ACAP3Q96P50 834 aa23.71■■□□□ 1.39
ECHDC3-205ENST00000496136 RNF39Q9H2S5 420 aa23.71■■□□□ 1.39
ECHDC3-205ENST00000496136 METTL14Q9HCE5 456 aaKnown RBP23.71■■□□□ 1.39
ECHDC3-205ENST00000496136 SNTG2Q9NY99 539 aa23.71■■□□□ 1.39
ECHDC3-205ENST00000496136 C9IYK1 514 aa23.7■■□□□ 1.39
ECHDC3-205ENST00000496136 ENOX2Q16206 610 aaKnown RBP23.7■■□□□ 1.39
ECHDC3-205ENST00000496136 CNKSR3Q6P9H4 555 aa23.7■■□□□ 1.39
ECHDC3-205ENST00000496136 MRPL10Q7Z7H8 261 aaKnown RBP23.7■■□□□ 1.39
ECHDC3-205ENST00000496136 CCDC94Q9BW85 323 aaPredicted RBP23.7■■□□□ 1.39
ECHDC3-205ENST00000496136 RBAKQ9NYW8 714 aaPredicted RBP23.7■■□□□ 1.39
ECHDC3-205ENST00000496136 CITO14578 2027 aa23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 LRRC10BA6NIK2 292 aa23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 RAB27AP51159 221 aa23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 MCCD1P59942 119 aaPredicted RBP23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 FAM189BP81408 668 aa23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 POU5F1Q01860 360 aaKnown RBP23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 MLLT1Q03111 559 aaPredicted RBP23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 CYP24A1Q07973 514 aa23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 GSE1Q14687 1217 aa23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 INTS8Q75QN2 995 aaKnown RBP23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 RPF1Q9H9Y2 349 aaKnown RBP23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 ZMYND8Q9ULU4 1186 aaPredicted RBP23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 TRIP11Q15643 1979 aa23.7■■□□□ 1.38
ECHDC3-205ENST00000496136 FSD2A1L4K1 749 aa23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 MEFVO15553 781 aaPredicted RBP23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 SKIP12755 728 aa23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 AKAP5P24588 427 aa23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 SPAG1Q07617 926 aa23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 IKBKEQ14164 716 aa23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 SLC10A6Q3KNW5 377 aa23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 BRSK2Q8IWQ3 736 aa23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 TRIM59Q8IWR1 403 aa23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 PLEKHO2Q8TD55 490 aa23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 IL23AQ9NPF7 189 aa23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 C1orf112Q9NSG2 853 aa23.69■■□□□ 1.38
ECHDC3-205ENST00000496136 PFKMP08237 780 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 CXCL8P10145 99 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 ACRP10323 421 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 MTIF2P46199 727 aaKnown RBP23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 RGS19P49795 217 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 WNT7BP56706 349 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 BFSP1Q12934 665 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 KRT31Q15323 416 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 UVSSAQ2YD98 709 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 C16orf59Q7L2K0 433 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 ECHDC2Q86YB7 292 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 PARD3BQ8TEW8 1205 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 CCDC127Q96BQ5 260 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 TUBGCP2Q9BSJ2 902 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 APOL6Q9BWW8 343 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 PDE11AQ9HCR9 933 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 LIMA1Q9UHB6 759 aaKnown RBP23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 TTC3P53804 2025 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 GOLGA6L3A6NEY3 463 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 MEIS3P2A8K0S8 358 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 KRT13P13646 458 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 ATF7P17544 494 aaPredicted RBP23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 VAMP7P51809 220 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 DLG4P78352 724 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 FPGSQ05932 587 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 PSMD6Q15008 389 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 APTXQ7Z2E3 356 aaKnown RBP23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 FAM212AQ96EL1 285 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 PARP2Q9UGN5 583 aa23.68■■□□□ 1.38
ECHDC3-205ENST00000496136 TTC26A0AVF1 554 aa23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 TULP1O00294 542 aaPredicted RBP23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 RECQL4O94761 1208 aa23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 ITGA4P13612 1032 aa23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 PPIGQ13427 754 aaKnown RBP eCLIP23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 ALKAL1Q6UXT8 129 aa23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 ZNF598Q86UK7 904 aaKnown RBP23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 TMC2Q8TDI7 906 aa23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 LPPQ93052 612 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms