RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 FBXL13Q8NEE6 735 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 GLG1Q92896 1179 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 KCNN1Q92952 543 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 BORCS6Q96GS4 357 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 NIFKQ9BYG3 293 aaKnown RBP7.48□□□□□ -1.21
USP39-219ENST00000496047 PRKD2Q9BZL6 878 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 ZMYND15Q9H091 742 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 PORCNQ9H237 461 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 POLD4Q9HCU8 107 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 GPRC5CQ9NQ84 441 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 TRIM10Q9UDY6 481 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 ADAMTS1Q9UHI8 967 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 SNX12Q9UMY4 172 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 SYNGAP1Q96PV0 1343 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 DOCK3Q8IZD9 2030 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 TARSL2A2RTX5 802 aaKnown RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 ENC1O14682 589 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 BUB1O43683 1085 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 ZNF862O60290 1169 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 PIGRP01833 764 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 TMEM253P0C7T8 217 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 TCF7P36402 384 aaPredicted RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 PIK3CAP42336 1068 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 BPIFB4P59827 614 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 TNNC1P63316 161 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 PTK2Q05397 1052 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 CBWD6Q4V339 395 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 EPC2Q52LR7 807 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 CBWD3Q5JTY5 395 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 CBWD5Q5RIA9 395 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 IER5Q5VY09 327 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 PLPPR4Q7Z2D5 763 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 APBB1IPQ7Z5R6 666 aaPredicted RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 GOLGA6L1Q8N7Z2 621 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 C2orf69Q8N8R5 385 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 MSANTD4Q8NCY6 345 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 GPRC5AQ8NFJ5 357 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 U2AF1L4Q8WU68 220 aaKnown RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 SCFD2Q8WU76 684 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 PSPC1Q8WXF1 523 aaKnown RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 RFFLQ8WZ73 363 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 DHX38Q92620 1227 aaKnown RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 TRIM11Q96F44 468 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 PBKQ96KB5 322 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 CAPZA3Q96KX2 299 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 OSBPL9Q96SU4 736 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 NAP1L3Q99457 506 aaPredicted RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 PARK7Q99497 189 aaKnown RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 CBWD1Q9BRT8 395 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 MRPL4Q9BYD3 311 aaKnown RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 LACRTQ9GZZ8 138 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 SMARCAD1Q9H4L7 1026 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 TAF1DQ9H5J8 278 aaPredicted RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 DHX33Q9H6R0 707 aaKnown RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 ZNF408Q9H9D4 720 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 VTA1Q9NP79 307 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 SIX2Q9NPC8 291 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 ARHGAP28Q9P2N2 729 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 LIMD1Q9UGP4 676 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 NAGPAQ9UK23 515 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 AGO2Q9UKV8 859 aaKnown RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 USP20Q9Y2K6 914 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 DIS3Q9Y2L1 958 aaKnown RBP7.47□□□□□ -1.21
USP39-219ENST00000496047 PCDHGC5Q9Y5F6 944 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 CAPN6Q9Y6Q1 641 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 CASP8AP2Q9UKL3 1982 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 NCANO14594 1321 aa7.47□□□□□ -1.21
USP39-219ENST00000496047 COL1A2P08123 1366 aa7.46□□□□□ -1.21
USP39-219ENST00000496047 TRIP12Q14669 1992 aaPredicted RBP7.46□□□□□ -1.21
USP39-219ENST00000496047 A0A087X0T9 212 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 IGKV6D-21A0A0A0MT36 114 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 A0A0U1RQJ8 604 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 TMEM150BA6NC51 233 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 ANKRD62A6NC57 917 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 GOLGA8IPA6NC78 632 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 GOLGA8JA6NMD2 632 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 TMCO5BA8MYB1 307 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 NRG2O14511 850 aaPredicted RBP7.46□□□□□ -1.22
USP39-219ENST00000496047 ZNF263O14978 683 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 NKRFO15226 690 aaKnown RBP eCLIP7.46□□□□□ -1.22
USP39-219ENST00000496047 ASAP2O43150 1006 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 STRNO43815 780 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 HBP1O60381 514 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 SORBS3O60504 671 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 TLR2O60603 784 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 PHACTR2O75167 634 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 PALMO75781 387 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 FAM228BP0C875 321 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 TXNP10599 105 aaKnown RBP7.46□□□□□ -1.22
USP39-219ENST00000496047 TNNI1P19237 187 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 TBXAS1P24557 533 aaPredicted RBP7.46□□□□□ -1.22
USP39-219ENST00000496047 KLRC1P26715 233 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 USP8P40818 1118 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 GCLMP48507 274 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 YWHAEP62258 255 aaKnown RBP7.46□□□□□ -1.22
USP39-219ENST00000496047 CYP24A1Q07973 514 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 BIRC3Q13489 604 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 LAMC2Q13753 1193 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 KIF22Q14807 665 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 RPS6KA1Q15418 735 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms