RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SPEM1Q8N4L4 309 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 GLIS3Q8NEA6 775 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 PGBD4Q96DM1 585 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 FAM227BQ96M60 508 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 SMOC1Q9H4F8 434 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 BRD9Q9H8M2 597 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 FAM105AQ9NUU6 356 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 ZSWIM5Q9P217 1185 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 KANSL3Q9P2N6 904 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 PIN4Q9Y237 131 aaKnown RBP10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 MSRB2Q9Y3D2 182 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 NAV2Q8IVL1 2488 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 IGKV6D-21A0A0A0MT36 114 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 SHISA7A6NL88 538 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 MEIS3P2A8K0S8 358 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 DDX39AO00148 427 aaKnown RBP10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 HYAL3O43820 417 aaPredicted RBP10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 DDHD2O94830 711 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 PAPSS2O95340 614 aaPredicted RBP10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 ATG7O95352 703 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 HNRNPA1P09651 372 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 SFPQP23246 707 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 GPC3P51654 580 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 C19orf57Q0VDD7 668 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 LRRC32Q14392 662 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 PLA2G2CQ5R387 149 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 PPM1LQ5SGD2 360 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 EFCAB12Q6NXP0 572 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 MIS18BP1Q6P0N0 1132 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 TAS1R1Q7RTX1 841 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 ZNF589Q86UQ0 364 aaPredicted RBP10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 WDR5BQ86VZ2 330 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 NPAS3Q8IXF0 933 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 LRRC71Q8N4P6 559 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 ITFG1Q8TB96 612 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 EVI5LQ96CN4 794 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 MKNK1Q9BUB5 465 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 PRR14Q9BWN1 585 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 KRT23Q9C075 422 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 MARCH5Q9NX47 278 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 SEC63Q9UGP8 760 aaKnown RBP10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 PIAS3Q9Y6X2 628 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 ADAMTS20P59510 1910 aa10.84□□□□□ -0.67
SMARCAL1-213ENST00000496037 K7ESF4 209 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 CCL16O15467 120 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 RPP40O75818 363 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 POMCP01189 267 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 CCDC192P0DO97 292 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 CSRP1P21291 193 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 RAP1GAPP47736 663 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 OR1G1P47890 313 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 ITGB3BPQ13352 177 aaPredicted RBP10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 TCEAL6Q6IPX3 200 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 ABHD15Q6UXT9 468 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 GAB3Q8WWW8 586 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 TCEAL3Q969E4 200 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 BBC3Q96PG8 261 aaPredicted RBP10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 MXRA8Q9BRK3 442 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 GCOM2Q9BZD3 368 aaPredicted RBP10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 CNNM2Q9H8M5 875 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 PSTPIP2Q9H939 334 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 RSAD1Q9HA92 442 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 FBXW11Q9UKB1 542 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 KCNH3Q9ULD8 1083 aa10.83□□□□□ -0.68
SMARCAL1-213ENST00000496037 CYSRT1A8MQ03 144 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 ZNF623O75123 536 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 NR1I2O75469 434 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 CSDE1O75534 798 aaKnown RBP10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 C8AP07357 584 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 CHRNB1P11230 501 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 MX1P20591 662 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 HOXA9P31269 272 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 KCNC4Q03721 635 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 TROAPQ12815 778 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 GAS6Q14393 721 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 GRM2Q14416 872 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 PABPC1LQ4VXU2 614 aaKnown RBP10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 SWSAP1Q6NVH7 229 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 LILRA6Q6PI73 481 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 KBTBD6Q86V97 674 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 RNF168Q8IYW5 571 aaPredicted RBP10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 ING5Q8WYH8 240 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 UBXN4Q92575 508 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 IRF7Q92985 503 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 ELSPBP1Q96BH3 223 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 RRP36Q96EU6 259 aaKnown RBP10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 MBOAT7Q96N66 472 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 AGO4Q9HCK5 861 aaKnown RBP10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 FNIP2Q9P278 1114 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 TCEAL9Q9UHQ7 104 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 KLK13Q9UKR3 277 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 MRPS23Q9Y3D9 190 aaKnown RBP10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 EVPLQ92817 2033 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 CNTNAP2Q9UHC6 1331 aa10.82□□□□□ -0.68
SMARCAL1-213ENST00000496037 CCNE2O96020 404 aa10.81□□□□□ -0.68
SMARCAL1-213ENST00000496037 RPL17P18621 184 aaKnown RBP10.81□□□□□ -0.68
SMARCAL1-213ENST00000496037 UBE2SQ16763 222 aa10.81□□□□□ -0.68
SMARCAL1-213ENST00000496037 USP41Q3LFD5 358 aa10.81□□□□□ -0.68
SMARCAL1-213ENST00000496037 C1orf228Q6PIY5 440 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms