RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	EEF1DP3	Q658K8	133 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	SHC4	Q6S5L8	630 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	IQUB	Q8NA54	791 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	GSTCD	Q8NEC7	633 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	MICAL1	Q8TDZ2	1067 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	DDX12P	Q92771	950 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	TMEM169	Q96HH4	297 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	ZFP42	Q96MM3	310 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	PYM1	Q9BRP8	204 aa	Known RBP	13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	TCHP	Q9BT92	498 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	TARS2	Q9BW92	718 aa	Known RBP	13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	APOL6	Q9BWW8	343 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	ST6GALNAC4	Q9H4F1	302 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	NGRN	Q9NPE2	291 aa	Known RBP	13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	SEL1L	Q9UBV2	794 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	PCDHA7	Q9UN72	937 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	USP20	Q9Y2K6	914 aa		13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.57	□□□□□ -0.24
MRPL55-233	ENST00000495899		A0A0C4DFX4	3053 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899		A0A087X0B3	334 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	FSD2	A1L4K1	749 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	MYMK	A6NI61	221 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	FSCN2	O14926	492 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	GAP43	P17677	238 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	PBX3	P40426	434 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	SLC11A1	P49279	550 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	ERVFC1	P60507	584 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	AMPD3	Q01432	767 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	DSC1	Q08554	894 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	GRIK3	Q13003	919 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	BMS1	Q14692	1282 aa	Known RBP	13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	MPZL3	Q6UWV2	235 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	DDX53	Q86TM3	631 aa	Known RBP	13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	FAM178B	Q8IXR5	827 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	COLGALT2	Q8IYK4	626 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	PDILT	Q8N807	584 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	DNAJC19	Q96DA6	116 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	PABPC5	Q96DU9	382 aa	Known RBP	13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	IGSF21	Q96ID5	467 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	ASB2	Q96Q27	587 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	GBP3	Q9H0R5	595 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	ZHX3	Q9H4I2	956 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	PRDM6	Q9NQX0	595 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	SNTG2	Q9NY99	539 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	FAM13B	Q9NYF5	915 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	DNAJB4	Q9UDY4	337 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	TBX20	Q9UMR3	447 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	FAN1	Q9Y2M0	1017 aa		13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	COL4A4	P53420	1690 aa	Predicted RBP	13.56	□□□□□ -0.24
MRPL55-233	ENST00000495899	REV3L	O60673	3130 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	GRXCR2	A6NFK2	248 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	NT5C1B-RDH14	C9J2C7	533 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	NRP1	O14786	923 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	IRS1	P35568	1242 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	GRM5	P41594	1212 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	SCNN1G	P51170	649 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	NUCB2	P80303	420 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	GTF2B	Q00403	316 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	HYAL1	Q12794	435 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	CTC1	Q2NKJ3	1217 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	ZNF568	Q3ZCX4	644 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	RESP18	Q5W5W9	173 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	DYM	Q7RTS9	669 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	TMC7	Q7Z402	723 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	SPATA32	Q96LK8	384 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	RPS6KC1	Q96S38	1066 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	FIZ1	Q96SL8	496 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	CDCA3	Q99618	268 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	TCF25	Q9BQ70	676 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	CCDC94	Q9BW85	323 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	CDT1	Q9H211	546 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	TNMD	Q9H2S6	317 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	MAGEF1	Q9HAY2	307 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	KBTBD4	Q9NVX7	518 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	MIOS	Q9NXC5	875 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	KLK14	Q9P0G3	267 aa		13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-233	ENST00000495899	MYO9B	Q13459	2157 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899		K7ENM7	598 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	ABLIM1	O14639	778 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	SNPH	O15079	494 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	CLDN3	O15551	220 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	B4GALT3	O60512	393 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	RECQL4	O94761	1208 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	PIGR	P01833	764 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	TH	P07101	528 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	CMA1	P23946	247 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	YARS	P54577	528 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	MCL1	Q07820	350 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	TUSC3	Q13454	348 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	KYAT1	Q16773	422 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	TJAP1	Q5JTD0	557 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	ADAL	Q6DHV7	355 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	CNNM4	Q6P4Q7	775 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	ZNF720	Q7Z2F6	126 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	MRPL43	Q8N983	215 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	LEO1	Q8WVC0	666 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	HVCN1	Q96D96	273 aa		13.54	□□□□□ -0.24

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