RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	SLC24A5	Q71RS6	500 aa		14.73	□□□□□ -0.05
APTX-231	ENST00000494973	NT5DC4	Q86YG4	428 aa		14.73	□□□□□ -0.05
APTX-231	ENST00000494973	ANP32B	Q92688	251 aa	Known RBP	14.73	□□□□□ -0.05
APTX-231	ENST00000494973	SAAL1	Q96ER3	474 aa		14.73	□□□□□ -0.05
APTX-231	ENST00000494973	FNBP1	Q96RU3	617 aa		14.73	□□□□□ -0.05
APTX-231	ENST00000494973	ASB7	Q9H672	318 aa		14.73	□□□□□ -0.05
APTX-231	ENST00000494973	RGS18	Q9NS28	235 aa		14.73	□□□□□ -0.05
APTX-231	ENST00000494973	SAMSN1	Q9NSI8	373 aa	Known RBP	14.73	□□□□□ -0.05
APTX-231	ENST00000494973	FAM105A	Q9NUU6	356 aa		14.73	□□□□□ -0.05
APTX-231	ENST00000494973	LIMA1	Q9UHB6	759 aa	Known RBP	14.73	□□□□□ -0.05
APTX-231	ENST00000494973	CPSF3	Q9UKF6	684 aa	Known RBP	14.73	□□□□□ -0.05
APTX-231	ENST00000494973	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	14.73	□□□□□ -0.05
APTX-231	ENST00000494973		A0A0U1RQF3	1178 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	FSD2	A1L4K1	749 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	TTLL13P	A6NNM8	815 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	HOXA2	O43364	376 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	XPOT	O43592	962 aa	Known RBP	14.72	□□□□□ -0.05
APTX-231	ENST00000494973	BAIAP3	O94812	1187 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	EOMES	O95936	686 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	STAG3L1	P0CL83	205 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	GTF2H1	P32780	548 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	CYP24A1	Q07973	514 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	CETN1	Q12798	172 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	IKBKE	Q14164	716 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	PSMD6	Q15008	389 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	SARM1	Q6SZW1	724 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	THNSL1	Q8IYQ7	743 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	ZBTB45	Q96K62	511 aa	Predicted RBP	14.72	□□□□□ -0.05
APTX-231	ENST00000494973	MFSD14A	Q96MC6	490 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	ADAM2	Q99965	735 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	TUBGCP2	Q9BSJ2	902 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	TSPYL2	Q9H2G4	693 aa	Predicted RBP	14.72	□□□□□ -0.05
APTX-231	ENST00000494973	ELAC1	Q9H777	363 aa	Known RBP	14.72	□□□□□ -0.05
APTX-231	ENST00000494973	PCDHB2	Q9Y5E7	798 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	NR2E3	Q9Y5X4	410 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	RALGAPA2	Q2PPJ7	1873 aa		14.72	□□□□□ -0.05
APTX-231	ENST00000494973	UMODL1	Q5DID0	1318 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	ABHD14A-ACY1	A0A1B0GW23	586 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	TRIM43B	A6NCK2	446 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	LRRC10B	A6NIK2	292 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	FAM189A1	O60320	539 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	ITGA4	P13612	1032 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	VAMP7	P51809	220 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	MCCD1	P59942	119 aa	Predicted RBP	14.71	□□□□□ -0.05
APTX-231	ENST00000494973	DCAF17	Q5H9S7	520 aa	Predicted RBP	14.71	□□□□□ -0.05
APTX-231	ENST00000494973	UBXN11	Q5T124	520 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	FKBP15	Q5T1M5	1219 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	CBWD2	Q8IUF1	395 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	CREBRF	Q8IUR6	639 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	TRIM59	Q8IWR1	403 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	C7orf61	Q8IZ16	206 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	DBF4B	Q8NFT6	615 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	TRIM43	Q96BQ3	446 aa	Predicted RBP	14.71	□□□□□ -0.05
APTX-231	ENST00000494973	SCLY	Q96I15	445 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	IKZF4	Q9H2S9	585 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	GRPEL1	Q9HAV7	217 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	USP20	Q9Y2K6	914 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	GIT1	Q9Y2X7	761 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	DERA	Q9Y315	318 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	IPP	Q9Y573	584 aa		14.71	□□□□□ -0.05
APTX-231	ENST00000494973	ALPK3	Q96L96	1907 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	CIT	O14578	2027 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	GOLGA8IP	A6NC78	632 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	GOLGA8J	A6NMD2	632 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	P4HA2	O15460	535 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	CASP4	P49662	377 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	ACOT2	P49753	483 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	FANCC	Q00597	558 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	FPGS	Q05932	587 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	KRT31	Q15323	416 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	TCERG1L	Q5VWI1	586 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	PSRC1	Q6PGN9	363 aa	Predicted RBP	14.7	□□□□□ -0.06
APTX-231	ENST00000494973	MRPL10	Q7Z7H8	261 aa	Known RBP	14.7	□□□□□ -0.06
APTX-231	ENST00000494973	CDR2L	Q86X02	465 aa	Predicted RBP	14.7	□□□□□ -0.06
APTX-231	ENST00000494973	IRF2BP1	Q8IU81	584 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	WDR49	Q8IV35	697 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	RDH13	Q8NBN7	331 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	CACTIN	Q8WUQ7	758 aa	Known RBP	14.7	□□□□□ -0.06
APTX-231	ENST00000494973	BORCS6	Q96GS4	357 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	CGRRF1	Q99675	332 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	LBHD1	Q9BQE6	289 aa	Predicted RBP	14.7	□□□□□ -0.06
APTX-231	ENST00000494973	EIF2A	Q9BY44	585 aa	Known RBP	14.7	□□□□□ -0.06
APTX-231	ENST00000494973	HAPLN2	Q9GZV7	340 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	HSD3B7	Q9H2F3	369 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	MTIF3	Q9H2K0	278 aa	Known RBP	14.7	□□□□□ -0.06
APTX-231	ENST00000494973	TMX1	Q9H3N1	280 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	IL23A	Q9NPF7	189 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	C2CD2	Q9Y426	696 aa		14.7	□□□□□ -0.06
APTX-231	ENST00000494973	GTPBP10	A4D1E9	387 aa	Known RBP	14.69	□□□□□ -0.06
APTX-231	ENST00000494973	LGALS16	A8MUM7	142 aa		14.69	□□□□□ -0.06
APTX-231	ENST00000494973		C9IYK1	514 aa		14.69	□□□□□ -0.06
APTX-231	ENST00000494973	PMM2	O15305	246 aa		14.69	□□□□□ -0.06
APTX-231	ENST00000494973	AFP	P02771	609 aa	Known RBP	14.69	□□□□□ -0.06
APTX-231	ENST00000494973	ADRB2	P07550	413 aa		14.69	□□□□□ -0.06
APTX-231	ENST00000494973	COPB1	P53618	953 aa	Known RBP	14.69	□□□□□ -0.06
APTX-231	ENST00000494973	VWA3B	Q502W6	1294 aa		14.69	□□□□□ -0.06
APTX-231	ENST00000494973	CRELD2	Q6UXH1	353 aa	Predicted RBP	14.69	□□□□□ -0.06
APTX-231	ENST00000494973	DEFB128	Q7Z7B8	93 aa		14.69	□□□□□ -0.06
APTX-231	ENST00000494973	ECHDC2	Q86YB7	292 aa		14.69	□□□□□ -0.06
APTX-231	ENST00000494973	PARD3B	Q8TEW8	1205 aa		14.69	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms