RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 ANKRD2Q9GZV1 360 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 DDX47Q9H0S4 455 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 ASCC2Q9H1I8 757 aaPredicted RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 MYLK2Q9H1R3 596 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 VPS16Q9H269 839 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 EPB41L4BQ9H329 900 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 FOXP1Q9H334 677 aaPredicted RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 BOLA2Q9H3K6 86 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 SEC31BQ9NQW1 1179 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 INIPQ9NRY2 104 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 USP40Q9NVE5 1235 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 ETNK2Q9NVF9 386 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.92□□□□□ -1.94
MDC1-208ENST00000494654 ZDHHC7Q9NXF8 308 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 PLK2Q9NYY3 685 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 SMARCAL1Q9NZC9 954 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 SCHIP1Q9P0W5 487 aaPredicted RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 VPS54Q9P1Q0 977 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 ARHGAP20Q9P2F6 1191 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 KLHL14Q9P2G3 628 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 STX18Q9P2W9 335 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 HSFX1Q9UBD0 423 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 DNAJB4Q9UDY4 337 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 SAP30BPQ9UHR5 308 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 ZNHIT2Q9UHR6 403 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 DBNLQ9UJU6 430 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 HCN2Q9UL51 889 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 ZMIZ1Q9ULJ6 1067 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 TFR2Q9UP52 801 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 PLAGL2Q9UPG8 496 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 DMTF1Q9Y222 760 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 NOC2LQ9Y3T9 749 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 TTLL3Q9Y4R7 772 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 PCDHA13Q9Y5I0 950 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 CD2APQ9Y5K6 639 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 FADS3Q9Y5Q0 445 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 USH1CQ9Y6N9 552 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 LY75O60449 1722 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 FRMPD4Q14CM0 1322 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 BAZ2BQ9UIF8 2168 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 ZNF236Q9UL36 1845 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 A0A0G2JMZ2 1700 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 LRRC37A2A6NM11 1700 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 LRRC37AA6NMS7 1700 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 A0A087X0B3 334 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 BICDL2A1A5D9 508 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SLC35F4A4IF30 521 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TRIM43BA6NCK2 446 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TMEM247A6NEH6 219 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 GNAT3A8MTJ3 354 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 GOLGA8TH3BQL2 631 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 BOLA2-SMG1P6H3BVE0 249 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 GRM8O00222 908 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 MATN2O00339 956 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TERTO14746 1132 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 NDC80O14777 642 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PSMA7O14818 248 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 RGS16O15492 202 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 TTI1O43156 1089 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 NCK2O43639 380 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 AP1G1O43747 822 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SUPT3HO75486 399 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PDE5AO76074 875 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TPPPO94811 219 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 UPP2O95045 317 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PSMG1O95456 288 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 MYCP01106 439 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 GNRH1P01148 92 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SHBGP04278 402 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 INHAP05111 366 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 ZFYP08048 801 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 GOLGA8HP0CJ92 632 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SMIM18P0DKX4 95 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 ZBTB48P10074 688 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 HSPD1P10809 573 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 PTPN2P17706 415 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 GM2AP17900 193 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 S100A1P23297 94 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PTPN4P29074 926 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 EPHB2P29323 1055 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 CRABP2P29373 138 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 STIP1P31948 543 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 HALP42357 657 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TXKP42681 527 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 MAGEA1P43355 309 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TOB1P50616 345 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 RNF144AP50876 292 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 USP11P51784 963 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PMS2P54278 862 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 ADARP55265 1226 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 ARHGAP4P98171 946 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PFKPQ01813 784 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 CDR2Q01850 454 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PLCB3Q01970 1234 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 MAP3K10Q02779 954 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 GRIN1Q05586 938 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 RNASELQ05823 741 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 SLC34A1Q06495 639 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TEFQ10587 303 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms