RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 ARPC4-TTLL3A0A0A6YYG9 625 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 NUTM2BA6NNL0 878 aaPredicted RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 NUTM2EB1AL46 878 aaPredicted RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 TMEM114B3SHH9 223 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 KCNJ18B7U540 433 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 H3BSA7 217 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ARHGAP33O14559 1287 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 GNPATO15228 680 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 P4HA1P13674 534 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 CREB1P16220 341 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 PRLRP16471 622 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 HMOX2P30519 316 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 SLC5A2P31639 672 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ATICP31939 592 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 STX2P32856 288 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ETV3P41162 512 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 SLC5A3P53794 718 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 PFKPQ01813 784 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 GRIN1Q05586 938 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 KCNA1Q09470 495 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 KCNJ12Q14500 433 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 SLC39A14Q15043 492 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 PARP6Q2NL67 630 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 MMEL1Q495T6 779 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 TMEM63BQ5T3F8 832 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 MAP3K21Q5TCX8 1036 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 EGFLAMQ63HQ2 1017 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 DENND2CQ68D51 928 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ITPRIPL1Q6GPH6 555 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ZNF746Q6NUN9 644 aaPredicted RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 IYDQ6PHW0 289 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 WDR59Q6PJI9 974 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 C3orf62Q6ZUJ4 267 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 PEX26Q7Z412 305 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ADAT2Q7Z6V5 191 aaKnown RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 CCDC25Q86WR0 208 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 CENPSQ8N2Z9 138 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 LINC00469Q8N7U9 141 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 FLCNQ8NFG4 579 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 PLEKHO2Q8TD55 490 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 HELQQ8TDG4 1101 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ACTRT2Q8TDY3 377 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 FAR2Q96K12 515 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 TLR10Q9BXR5 811 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 CELF4Q9BZC1 486 aaKnown RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 CRNKL1Q9BZJ0 848 aaKnown RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 ZNF287Q9HBT7 754 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ANLNQ9NQW6 1124 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 TYW1Q9NV66 732 aaKnown RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 NDE1Q9NXR1 346 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 RRN3Q9NYV6 651 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 GPRC5DQ9NZD1 345 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 VPS54Q9P1Q0 977 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 AMACRQ9UHK6 382 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 APPL1Q9UKG1 709 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 NDUFB9Q9Y6M9 179 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 NRXN1Q9ULB1 1477 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ADGRB3O60242 1522 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ARHGAP5Q13017 1502 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 TMEM120BA0PK00 339 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 NBPF26B4DH59 902 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 KCNK3O14649 394 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 PFDN6O15212 129 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 GYG2O15488 501 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 TSPAN1O60635 241 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ZC3H11AO75152 810 aaKnown RBP eCLIP4.29□□□□□ -1.72
ATG3-207ENST00000494571 KRT4P19013 534 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 AMPD1P23109 780 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 COPB2P35606 906 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 MMP13P45452 471 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 MTIF2P46199 727 aaKnown RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 CPA2P48052 419 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 CCT4P50991 539 aaKnown RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 STAT2P52630 851 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 CDC16Q13042 620 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 MORC3Q14149 939 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 SUZ12Q15022 739 aaKnown RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 CNGA2Q16280 664 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 PHKG1Q16816 387 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 TAF1BQ53T94 588 aaPredicted RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 C10orf76Q5T2E6 689 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 RRAGBQ5VZM2 374 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ZNF772Q68DY9 489 aaPredicted RBP4.29□□□□□ -1.72
ATG3-207ENST00000494571 SPOPLQ6IQ16 392 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 TMC3Q7Z5M5 1100 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 USP37Q86T82 979 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 AACSQ86V21 672 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 DNAAF5Q86Y56 855 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 C2CD5Q86YS7 1000 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 PLPP6Q8IY26 295 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 FAM9CQ8IZT9 166 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 LILRB2Q8N423 598 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 BBOF1Q8ND07 529 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 HIPK4Q8NE63 616 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 TBC1D16Q8TBP0 767 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 ACTRT1Q8TDG2 376 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 OXER1Q8TDS5 423 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 CENPTQ96BT3 561 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 TLCD1Q96CP7 247 aa4.29□□□□□ -1.72
ATG3-207ENST00000494571 FAM20AQ96MK3 541 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms