RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SESTD1Q86VW0 696 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 BRSK2Q8IWQ3 736 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 ZNF687Q8N1G0 1237 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 NME8Q8N427 588 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 LRRC71Q8N4P6 559 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 RDH13Q8NBN7 331 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 RNF149Q8NC42 400 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 KLHDC9Q8NEP7 349 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 HELQQ8TDG4 1101 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 TRIB2Q92519 343 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 SEMA4DQ92854 862 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 JAKMIP2Q96AA8 810 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 SAAL1Q96ER3 474 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 FAXDC2Q96IV6 333 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 FAM81BQ96LP2 452 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 ARHGAP39Q9C0H5 1083 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 INTS2Q9H0H0 1204 aaKnown RBP7.37□□□□□ -1.23
MSH5-217ENST00000494458 HAUS4Q9H6D7 363 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 SUGCTQ9HAC7 445 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 PRMT7Q9NVM4 692 aaPredicted RBP7.37□□□□□ -1.23
MSH5-217ENST00000494458 GCNT4Q9P109 453 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 GABRQQ9UN88 632 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 CNTN6Q9UQ52 1028 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 FHOD1Q9Y613 1164 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 A0A0U1RQJ8 604 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 GOLGA8IPA6NC78 632 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 RCCD1A6NED2 376 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 GOLGA8JA6NMD2 632 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 F8VZ95 297 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 CLDN3O15551 220 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 MEFVO15553 781 aaPredicted RBP7.36□□□□□ -1.23
MSH5-217ENST00000494458 SEPT4O43236 478 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 AOC2O75106 756 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 ADAMTS4O75173 837 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 ABL1P00519 1130 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 PRKCBP05771 671 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 SRGAP2CP0DJJ0 459 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 SMIM10L2AP0DMW4 78 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 SMIM10L2BP0DMW5 78 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 FERP16591 822 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 HOXA11P31270 313 aaPredicted RBP7.36□□□□□ -1.23
MSH5-217ENST00000494458 SOX5P35711 763 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 EIF4A3P38919 411 aaKnown RBP7.36□□□□□ -1.23
MSH5-217ENST00000494458 PHKA2P46019 1235 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 GCLMP48507 274 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 PSEN1P49768 467 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 PSEN2P49810 448 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 MXI1P50539 228 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 CLCN3P51790 818 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 KIF11P52732 1056 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 VAV2P52735 878 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 WNT7BP56706 349 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 MYL7Q01449 175 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 CETN1Q12798 172 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 MFSD10Q14728 455 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 TCEAL1Q15170 157 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 SURF1Q15526 300 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 SLC18A3Q16572 532 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 FSCN1Q16658 493 aaKnown RBP7.36□□□□□ -1.23
MSH5-217ENST00000494458 KIAA0753Q2KHM9 967 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 DCAF17Q5H9S7 520 aaPredicted RBP7.36□□□□□ -1.23
MSH5-217ENST00000494458 VARS2Q5ST30 1063 aaKnown RBP7.36□□□□□ -1.23
MSH5-217ENST00000494458 TCERG1LQ5VWI1 586 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 MFSD14CQ5VZR4 134 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 MPZL3Q6UWV2 235 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 ENOSF1Q7L5Y1 443 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 CACNA2D4Q7Z3S7 1137 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 RHPN2Q8IUC4 686 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 ZBTB8OSQ8IWT0 167 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 FAM71AQ8IYT1 594 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 UBR7Q8N806 425 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 ACRBPQ8NEB7 543 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 FBXL13Q8NEE6 735 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 CXorf38Q8TB03 319 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 PXYLP1Q8TE99 480 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 LMBR1Q8WVP7 490 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 ATRIPQ8WXE1 791 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 SHC3Q92529 594 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 CCDC42Q96M95 316 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 KREMEN1Q96MU8 473 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 FAM213AQ9BRX8 229 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 DESI2Q9BSY9 194 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 LACRTQ9GZZ8 138 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 NLRC4Q9NPP4 1024 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 RAB20Q9NX57 234 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 RNF186Q9NXI6 227 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 SRRDQ9UH36 339 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 DNAJC12Q9UKB3 198 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 INTUQ9ULD6 942 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 BOLA1Q9Y3E2 137 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 THSD7BQ9C0I4 1608 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 CASP8AP2Q9UKL3 1982 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 ZSWIM8A7E2V4 1837 aa7.36□□□□□ -1.23
MSH5-217ENST00000494458 PTPRJQ12913 1337 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 A0A087WZ62 844 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 GPR25O00155 361 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 FOXN3O00409 490 aaPredicted RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 EVI5O60447 810 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 LRRN2O75325 713 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 VNN1O95497 513 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms