RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 A0A087X0T9 212 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 SMIM23A6NLE4 172 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 H0Y3Z8 333 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 LAD1O00515 517 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 MAP3K7O43318 606 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 TLR2O60603 784 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 FAM228BP0C875 321 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 CALM1P0DP23 149 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 CALM2P0DP24 149 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 CALM3P0DP25 149 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 PTPN4P29074 926 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 USP46P62068 366 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 PPATQ06203 517 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 SLC34A1Q06495 639 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 MGAT5Q09328 741 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 KLHL30Q0D2K2 578 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 AP1B1Q10567 949 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 STRN3Q13033 797 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 RASA3Q14644 834 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 NPY5RQ15761 445 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 ASIC2Q16515 512 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 SLC4A8Q2Y0W8 1093 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 CAVIN4Q5BKX8 364 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 KIAA1755Q5JYT7 1200 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 FAM83BQ5T0W9 1011 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 DAB2IPQ5VWQ8 1189 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 DCAF15Q66K64 600 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 KLC3Q6P597 504 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 OTOP1Q7RTM1 612 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 CMTR1Q8N1G2 835 aaKnown RBP7.55□□□□□ -1.2
EPHA3-203ENST00000494014 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.55□□□□□ -1.2
EPHA3-203ENST00000494014 MXD3Q9BW11 206 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 CELF4Q9BZC1 486 aaKnown RBP7.55□□□□□ -1.2
EPHA3-203ENST00000494014 TRIM9Q9C026 710 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 MYLK2Q9H1R3 596 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 DENND2DQ9H6A0 471 aaPredicted RBP7.55□□□□□ -1.2
EPHA3-203ENST00000494014 DDX43Q9NXZ2 648 aaKnown RBP7.55□□□□□ -1.2
EPHA3-203ENST00000494014 ZNF212Q9UDV6 495 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 ITGB1BP2Q9UKP3 347 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 PAIP2BQ9ULR5 123 aaKnown RBP7.55□□□□□ -1.2
EPHA3-203ENST00000494014 SLC4A4Q9Y6R1 1079 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 SIPA1L1O43166 1804 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 ITGA4P13612 1032 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 RARGP13631 454 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 ADORA1P30542 326 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 STX2P32856 288 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 ASIC1P78348 528 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 KCNMA1Q12791 1236 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 STK4Q13043 487 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 TMEM259Q4ZIN3 620 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 MFSD14BQ5SR56 506 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 CCDC174Q6PII3 467 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 PPP1R21Q6ZMI0 780 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 LRRC74BQ6ZQY2 392 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 PIK3AP1Q6ZUJ8 805 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 ERO1BQ86YB8 467 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 CCNJLQ8IV13 435 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 C4orf32Q8N8J7 132 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 ANKLE1Q8NAG6 615 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 ZBTB8BQ8NAP8 495 aaPredicted RBP7.55□□□□□ -1.2
EPHA3-203ENST00000494014 SMYD1Q8NB12 490 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 EPS8L3Q8TE67 593 aaKnown RBP7.55□□□□□ -1.2
EPHA3-203ENST00000494014 ARHGEF2Q92974 986 aaKnown RBP7.55□□□□□ -1.2
EPHA3-203ENST00000494014 LENG1Q96BZ8 264 aaPredicted RBP7.55□□□□□ -1.2
EPHA3-203ENST00000494014 ERP27Q96DN0 273 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 LRRC37BQ96QE4 947 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 TSG101Q99816 390 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 TRIM51Q9BSJ1 452 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 IDI2Q9BXS1 227 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 MAF1Q9H063 256 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 SEMA6BQ9H3T3 888 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 CNNM1Q9NRU3 951 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 GINM1Q9NU53 330 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 LNPEPQ9UIQ6 1025 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 STXBP5LQ9Y2K9 1186 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 STARD13Q9Y3M8 1113 aa7.55□□□□□ -1.2
EPHA3-203ENST00000494014 RPTORQ8N122 1335 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 ZNF532Q9HCE3 1301 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 ZNF236Q9UL36 1845 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 TMEM221A6NGB7 291 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 RIPK2O43353 540 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 TBC1D12O60347 775 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 ENTPD3O75355 529 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 CETPP11597 493 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 IDO1P14902 403 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 ZFXP17010 805 aaPredicted RBP7.54□□□□□ -1.2
EPHA3-203ENST00000494014 CALML3P27482 149 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 CDK7P50613 346 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 PLTPP55058 493 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 FUT2Q10981 343 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 APOBEC3HQ6NTF7 200 aaKnown RBP7.54□□□□□ -1.2
EPHA3-203ENST00000494014 C4orf50Q6ZRC1 276 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 TRMT10CQ7L0Y3 403 aaKnown RBP7.54□□□□□ -1.2
EPHA3-203ENST00000494014 ST13P4Q8IZP2 240 aaPredicted RBP7.54□□□□□ -1.2
EPHA3-203ENST00000494014 GUF1Q8N442 669 aaKnown RBP7.54□□□□□ -1.2
EPHA3-203ENST00000494014 TTC8Q8TAM2 541 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 FAM151AQ8WW52 585 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 TEKT1Q969V4 418 aa7.54□□□□□ -1.2
EPHA3-203ENST00000494014 AK8Q96MA6 479 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms