RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 A0A1W2PQJ5 194 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 LRRIQ3A6PVS8 624 aaPredicted RBP13.75□□□□□ -0.21
VPS52-220ENST00000493674 N4BP1O75113 896 aaKnown RBP13.75□□□□□ -0.21
VPS52-220ENST00000493674 CD4P01730 458 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 FGFR4P22455 802 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 ACOT2P49753 483 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 KLK7P49862 253 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 KYAT1Q16773 422 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 DCAF4L1Q3SXM0 396 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 CBWD6Q4V339 395 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 CBWD3Q5JTY5 395 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 CBWD5Q5RIA9 395 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 C15orf39Q6ZRI6 1047 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 CATSPER4Q7RTX7 472 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 ZBTB33Q86T24 672 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 FAM126BQ8IXS8 530 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 TC2NQ8N9U0 490 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 CCDC150Q8NCX0 1101 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 VTI1AQ96AJ9 217 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 CCDC51Q96ER9 411 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 CPB2Q96IY4 423 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 NUP58Q9BVL2 599 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 TRPV6Q9H1D0 765 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 SIX2Q9NPC8 291 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 PLCB1Q9NQ66 1216 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 COQ4Q9Y3A0 265 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 NOC2LQ9Y3T9 749 aaKnown RBP13.75□□□□□ -0.21
VPS52-220ENST00000493674 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.75□□□□□ -0.21
VPS52-220ENST00000493674 SQORQ9Y6N5 450 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 PTPRJQ12913 1337 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 M0QZ92 97 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 RNF225M0QZC1 329 aaPredicted RBP13.74□□□□□ -0.21
VPS52-220ENST00000493674 PES1O00541 588 aaKnown RBP13.74□□□□□ -0.21
VPS52-220ENST00000493674 MEFVO15553 781 aaPredicted RBP13.74□□□□□ -0.21
VPS52-220ENST00000493674 STX10O60499 249 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 NOL4O94818 638 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 MYCP01106 439 aaPredicted RBP13.74□□□□□ -0.21
VPS52-220ENST00000493674 FECHP22830 423 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 PON1P27169 355 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 TNFSF9P41273 254 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 MYL7Q01449 175 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 ENOX2Q16206 610 aaKnown RBP13.74□□□□□ -0.21
VPS52-220ENST00000493674 EPC2Q52LR7 807 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 FBXO47Q5MNV8 452 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 C1orf53Q5VUE5 145 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 TCERG1LQ5VWI1 586 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 NOTUMQ6P988 496 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 SLC27A1Q6PCB7 646 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 USP37Q86T82 979 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 CDR2LQ86X02 465 aaPredicted RBP13.74□□□□□ -0.21
VPS52-220ENST00000493674 CEP120Q8N960 986 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 LMO3Q8TAP4 145 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 CGRRF1Q99675 332 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 EDEM3Q9BZQ6 932 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 TMEM117Q9H0C3 514 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 GANQ9H2C0 597 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 KCNF1Q9H3M0 494 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 RBAKQ9NYW8 714 aaPredicted RBP13.74□□□□□ -0.21
VPS52-220ENST00000493674 FBXL5Q9UKA1 691 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 CAPN11Q9UMQ6 739 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 TSC2P49815 1807 aa13.74□□□□□ -0.21
VPS52-220ENST00000493674 TTC26A0AVF1 554 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 EPHB6O15197 1021 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 MFAP3LO75121 409 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 CLTAP09496 248 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 THPOP40225 353 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 GRM5P41594 1212 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 MATR3P43243 847 aaKnown RBP eCLIP13.73□□□□□ -0.21
VPS52-220ENST00000493674 MXI1P50539 228 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 FXR1P51114 621 aaKnown RBP eCLIP13.73□□□□□ -0.21
VPS52-220ENST00000493674 MLLT1Q03111 559 aaPredicted RBP13.73□□□□□ -0.21
VPS52-220ENST00000493674 SURF1Q15526 300 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 EXOC3L4Q17RC7 722 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 UBXN11Q5T124 520 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 GBP6Q6ZN66 633 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 CAGE1Q8TC20 777 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 CACTINQ8WUQ7 758 aaKnown RBP13.73□□□□□ -0.21
VPS52-220ENST00000493674 ZNF516Q92618 1163 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 TCHPQ9BT92 498 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 TMEM8AQ9HCN3 771 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 ERVK-5Q9HDB9 667 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 TOPORSQ9NS56 1045 aaPredicted RBP13.73□□□□□ -0.21
VPS52-220ENST00000493674 GINS2Q9Y248 185 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 DAAM1Q9Y4D1 1078 aa13.73□□□□□ -0.21
VPS52-220ENST00000493674 MROH7Q68CQ1 1323 aa13.72□□□□□ -0.21
VPS52-220ENST00000493674 IL18RAPO95256 599 aa13.72□□□□□ -0.21
VPS52-220ENST00000493674 PTMAP06454 111 aaKnown RBP13.72□□□□□ -0.21
VPS52-220ENST00000493674 CTSHP09668 335 aa13.72□□□□□ -0.21
VPS52-220ENST00000493674 STAG3L1P0CL83 205 aa13.72□□□□□ -0.21
VPS52-220ENST00000493674 HARSP12081 509 aaKnown RBP13.72□□□□□ -0.21
VPS52-220ENST00000493674 CKBP12277 381 aa13.72□□□□□ -0.21
VPS52-220ENST00000493674 EN2P19622 333 aaPredicted RBP13.72□□□□□ -0.21
VPS52-220ENST00000493674 CASP14P31944 242 aa13.72□□□□□ -0.21
VPS52-220ENST00000493674 GCLMP48507 274 aa13.72□□□□□ -0.21
VPS52-220ENST00000493674 CCZ1BP86790 482 aa13.72□□□□□ -0.21
VPS52-220ENST00000493674 CCZ1P86791 482 aaPredicted RBP13.72□□□□□ -0.21
VPS52-220ENST00000493674 LPIN1Q14693 890 aa13.72□□□□□ -0.21
VPS52-220ENST00000493674 ZACNQ401N2 412 aa13.72□□□□□ -0.21
VPS52-220ENST00000493674 SEZ6Q53EL9 994 aa13.72□□□□□ -0.21
VPS52-220ENST00000493674 ZNF618Q5T7W0 954 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms