RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 MTUS1Q9ULD2 1270 aa12.49□□□□□ -0.41
HDAC4-210ENST00000493582 PHF24Q9UPV7 400 aa12.49□□□□□ -0.41
HDAC4-210ENST00000493582 TRAF3IP3Q9Y228 551 aa12.49□□□□□ -0.41
HDAC4-210ENST00000493582 ADGRA3Q8IWK6 1321 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 TTC36A6NLP5 189 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 MIF4GDA9UHW6 222 aaKnown RBP12.48□□□□□ -0.41
HDAC4-210ENST00000493582 ATMINO43313 823 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-210ENST00000493582 COQ9O75208 318 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 PSMG1O95456 288 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 FTLP02792 175 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-210ENST00000493582 LYNP07948 512 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 HOXA7P31268 230 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-210ENST00000493582 CCNFP41002 786 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 WDR72Q3MJ13 1102 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 ZNF746Q6NUN9 644 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-210ENST00000493582 RNF207Q6ZRF8 634 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 HS2ST1Q7LGA3 356 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 NLRP9Q7RTR0 991 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 SCYL3Q8IZE3 742 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 ANKRD35Q8N283 1001 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 PPFIBP2Q8ND30 876 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 SLC20A1Q8WUM9 679 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 ATG4AQ8WYN0 398 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 TUBGCP5Q96RT8 1024 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 SYT11Q9BT88 431 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 SPATA16Q9BXB7 569 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 TLE6Q9H808 572 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 PICK1Q9NRD5 415 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 PDP2Q9P2J9 529 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 BCS1LQ9Y276 419 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 CFAP69A5D8W1 941 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 CLDN3O15551 220 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 EDF1O60869 148 aaKnown RBP12.48□□□□□ -0.41
HDAC4-210ENST00000493582 NR3C1P04150 777 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 FAM163BP0C2L3 166 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 FGFR1P11362 822 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 RXRBP28702 533 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 RHBDF2Q6PJF5 856 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 CLNKQ7Z7G1 428 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 SFR1Q86XK3 245 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 KIAA0825Q8IV33 1275 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 ZNF513Q8N8E2 541 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-210ENST00000493582 MRRFQ96E11 262 aaKnown RBP12.48□□□□□ -0.41
HDAC4-210ENST00000493582 STK33Q9BYT3 514 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 GPR88Q9GZN0 384 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 FAM192AQ9GZU8 254 aa12.48□□□□□ -0.41
HDAC4-210ENST00000493582 RREB1Q92766 1687 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 POTEFA5A3E0 1075 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 MEIS1O00470 390 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 GSC2O15499 205 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 MAP3K7O43318 606 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 EXOC3O60645 756 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 POTEIP0CG38 1075 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 CYP19A1P11511 503 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-210ENST00000493582 RFC4P35249 363 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 STAT3P40763 770 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 INHBCP55103 352 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 RTP1P59025 263 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 CYP1B1Q16678 543 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 CTC1Q2NKJ3 1217 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 CYP4F22Q6NT55 531 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 POTEGQ6S5H5 508 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 POTEEQ6S8J3 1075 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 SDCCAG8Q86SQ7 713 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-210ENST00000493582 C4orf33Q8N1A6 199 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 DYDC2Q96IM9 177 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 ZNF184Q99676 751 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-210ENST00000493582 LZTS2Q9BRK4 669 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 ATXN10Q9UBB4 475 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 MAGEB2O15479 319 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 IMPDH2P12268 514 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 RPA3P35244 121 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-210ENST00000493582 PSMC6P62333 389 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 ORC2Q13416 577 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-210ENST00000493582 OTOAQ7RTW8 1153 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 PLEKHG4BQ96PX9 1271 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 VCX3BQ9H321 246 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 VCX3AQ9NNX9 186 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 ARL8BQ9NVJ2 186 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 WHRNQ9P202 907 aa12.47□□□□□ -0.41
HDAC4-210ENST00000493582 hCG_2014768A0A024R1R8 64 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 GYG2O15488 501 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 AP1B1Q10567 949 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 OVGP1Q12889 678 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 RHOT2Q8IXI1 618 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 STMN2Q93045 179 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 BTBD10Q9BSF8 475 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 CHST7Q9NS84 486 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 LGALS13Q9UHV8 139 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 RPL26L1Q9UNX3 145 aaKnown RBP12.46□□□□□ -0.41
HDAC4-210ENST00000493582 A0A1B0GUL6 1792 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 ATAD5Q96QE3 1844 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 FRMPD2Q68DX3 1309 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-210ENST00000493582 GSTTP1A0A1W2PQM5 241 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 RSPH10B2B2RC85 870 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 FOXN3O00409 490 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-210ENST00000493582 SPOPO43791 374 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 RSPH10BP0C881 870 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 ITIH2P19823 946 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms