RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 ULK2Q8IYT8 1036 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 FAM43AQ8N2R8 423 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 CERS5Q8N5B7 392 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 ZBTB38Q8NAP3 1195 aaPredicted RBP5.5□□□□□ -1.53
CLIP4-212ENST00000493551 BRI3BPQ8WY22 251 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 PPP1R14AQ96A00 147 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 CLIP3Q96DZ5 547 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 LGR4Q9BXB1 951 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 GREM2Q9H772 168 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 MSL2Q9HCI7 577 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 STAP2Q9UGK3 403 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 TCP10L2B9ZVM9 353 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 PLIN1O60240 522 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 PDE8AO60658 829 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 TAF5LO75529 589 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 HOXC12P31275 282 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 HIBADHP31937 336 aaKnown RBP5.49□□□□□ -1.53
CLIP4-212ENST00000493551 LTBRP36941 435 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 CCT4P50991 539 aaKnown RBP5.49□□□□□ -1.53
CLIP4-212ENST00000493551 CACNB3P54284 484 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 DUSP8Q13202 625 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 RASA3Q14644 834 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 PPP2R5EQ16537 467 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 OTUD7BQ6GQQ9 843 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 TMEM87AQ8NBN3 555 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 PRMT6Q96LA8 375 aaPredicted RBP5.49□□□□□ -1.53
CLIP4-212ENST00000493551 PLA2G12BQ9BX93 195 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 GINM1Q9NU53 330 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 CPA4Q9UI42 421 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 ZMYND8Q9ULU4 1186 aaPredicted RBP5.49□□□□□ -1.53
CLIP4-212ENST00000493551 REXO2Q9Y3B8 237 aaKnown RBP5.49□□□□□ -1.53
CLIP4-212ENST00000493551 MED23Q9ULK4 1368 aa5.49□□□□□ -1.53
CLIP4-212ENST00000493551 RBBP6Q7Z6E9 1792 aaKnown RBP5.49□□□□□ -1.53
CLIP4-212ENST00000493551 MKI67P46013 3256 aaKnown RBP5.49□□□□□ -1.53
CLIP4-212ENST00000493551 SCG5P05408 212 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 SNRPB2P08579 225 aaKnown RBP5.48□□□□□ -1.53
CLIP4-212ENST00000493551 ENO2P09104 434 aaPredicted RBP5.48□□□□□ -1.53
CLIP4-212ENST00000493551 ZBTB48P10074 688 aaPredicted RBP5.48□□□□□ -1.53
CLIP4-212ENST00000493551 CCL5P13501 91 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 BMP5P22003 454 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 CTGFP29279 349 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 TMPOP42166 694 aaKnown RBP5.48□□□□□ -1.53
CLIP4-212ENST00000493551 COL10A1Q03692 680 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 GRIN1Q05586 938 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 VGLL4Q14135 290 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 ZNF394Q53GI3 561 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 STRIP1Q5VSL9 837 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 PPIL6Q8IXY8 311 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 KREMEN2Q8NCW0 462 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 BTN2A2Q8WVV5 523 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 SPATA32Q96LK8 384 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 CDC5LQ99459 802 aaKnown RBP5.48□□□□□ -1.53
CLIP4-212ENST00000493551 TTPALQ9BTX7 342 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 TMEM39BQ9GZU3 492 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 COA1Q9GZY4 146 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 TDRD3Q9H7E2 651 aaKnown RBP5.48□□□□□ -1.53
CLIP4-212ENST00000493551 TLR9Q9NR96 1032 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 CWC25Q9NXE8 425 aaPredicted RBP5.48□□□□□ -1.53
CLIP4-212ENST00000493551 DBF4Q9UBU7 674 aaPredicted RBP5.48□□□□□ -1.53
CLIP4-212ENST00000493551 ZNF646O15015 1829 aaPredicted RBP5.48□□□□□ -1.53
CLIP4-212ENST00000493551 PSME4Q14997 1843 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 TRIOBPQ9H2D6 2365 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 ZNF804BA4D1E1 1349 aa5.48□□□□□ -1.53
CLIP4-212ENST00000493551 OTOFQ9HC10 1997 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 KIAA0100Q14667 2235 aaKnown RBP5.47□□□□□ -1.53
CLIP4-212ENST00000493551 BTBD19C9JJ37 291 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 CPP00450 1065 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 PCCAP05165 728 aaPredicted RBP5.47□□□□□ -1.53
CLIP4-212ENST00000493551 FAHP16930 419 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 KRT4P19013 534 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 IGHMBP2P38935 993 aaKnown RBP5.47□□□□□ -1.53
CLIP4-212ENST00000493551 ECI1P42126 302 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 SOX9P48436 509 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 KIF22Q14807 665 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 SUPT20HL1Q3ZLR7 823 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 UBE3BQ7Z3V4 1068 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 ANKRD13AQ8IZ07 590 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 DEFB123Q8N688 67 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 RAET1EQ8TD07 263 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 ZBED3Q96IU2 234 aaPredicted RBP5.47□□□□□ -1.53
CLIP4-212ENST00000493551 SLC6A20Q9NP91 592 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 HYPKQ9NX55 129 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 CEP72Q9P209 647 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 MAP3K2Q9Y2U5 619 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 NR2E1Q9Y466 385 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 PCDHGB7Q9Y5F8 929 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 MYO3BQ8WXR4 1341 aa5.47□□□□□ -1.53
CLIP4-212ENST00000493551 HTTP42858 3142 aa5.46□□□□□ -1.53
CLIP4-212ENST00000493551 TMEM191CA6NGB0 347 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 SLC27A2O14975 620 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 PEX11BO96011 259 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 ITGAVP06756 1048 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 LCP1P13796 627 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 PSMC4P43686 418 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 CASP7P55210 303 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 LACTBP83111 547 aaPredicted RBP5.46□□□□□ -1.54
CLIP4-212ENST00000493551 PFKPQ01813 784 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 PRKCZQ05513 592 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 CHRNDQ07001 517 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 FOXL1Q12952 345 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms