RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 KCNH3Q9ULD8 1083 aa15.88■□□□□ 0.13
PRPF40A-211ENST00000493468 NAP1L2Q9ULW6 460 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-211ENST00000493468 MRPS17Q9Y2R5 130 aaKnown RBP15.88■□□□□ 0.13
PRPF40A-211ENST00000493468 HES2Q9Y543 173 aa15.88■□□□□ 0.13
PRPF40A-211ENST00000493468 CACNA1GO43497 2377 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 F5P12259 2224 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 RALGAPA1Q6GYQ0 2036 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 SLC30A4O14863 429 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 ECI2O75521 394 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 C8AP07357 584 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 PTENP60484 403 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 NTHL1P78549 312 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 POU5F1BQ06416 359 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 NCBP1Q09161 790 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 PPP2R5CQ13362 524 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 EMC2Q15006 297 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 NTRK3Q16288 839 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 TPRG1Q6ZUI0 275 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 RTL10Q7L3V2 364 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 NPAS3Q8IXF0 933 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 RASEFQ8IZ41 740 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 ZNF579Q8NAF0 562 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 VPS54Q9P1Q0 977 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 COL4A2P08572 1712 aa15.87■□□□□ 0.13
PRPF40A-211ENST00000493468 EML1O00423 815 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 P4HBP07237 508 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 TDGF1P13385 188 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 CD72P21854 359 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 NRLP54845 237 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 ADCY1Q08828 1119 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 FZD5Q13467 585 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 HSP90AA2PQ14568 343 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 MXD4Q14582 209 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 LAIR1Q6GTX8 287 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 PDXDC1Q6P996 788 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 PRSS55Q6UWB4 352 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 ZNF852Q6ZMS4 543 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 C4orf19Q8IY42 314 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 FBXL16Q8N461 479 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 ITFG1Q8TB96 612 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 DNASE1L2Q92874 299 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 KXD1Q9BQD3 176 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 CLSTN3Q9BQT9 956 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 TTPALQ9BTX7 342 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 TRIM6Q9C030 488 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 NXF3Q9H4D5 531 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 VAV3Q9UKW4 847 aa15.86■□□□□ 0.13
PRPF40A-211ENST00000493468 TADA2AO75478 443 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 IFNAR1P17181 557 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 FGD1P98174 961 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 MTAPQ13126 283 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 PSMD5Q16401 504 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 AMHR2Q16671 573 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 UVSSAQ2YD98 709 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 PPM1JQ5JR12 505 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 TSSK4Q6SA08 328 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 FAM177A1Q8N128 213 aaPredicted RBP15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 CELF5Q8N6W0 485 aaKnown RBP15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 LNX1Q8TBB1 728 aaPredicted RBP15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 CPB2Q96IY4 423 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 FAM20AQ96MK3 541 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 NFKBIZQ9BYH8 718 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 CHRDQ9H2X0 955 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 WRAP73Q9P2S5 460 aaPredicted RBP15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 RAB23Q9ULC3 237 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 PCDHA4Q9UN74 947 aa15.85■□□□□ 0.13
PRPF40A-211ENST00000493468 CNOT1A5YKK6 2376 aaKnown RBP15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 SHISA7A6NL88 538 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 M0R2N6 131 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 CCL16O15467 120 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 RETP07949 1114 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 ARF4P18085 180 aaPredicted RBP15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 YWHABP31946 246 aaKnown RBP15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 NLRP5P59047 1200 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 MBTD1Q05BQ5 628 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 ELAVL2Q12926 359 aaKnown RBP15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 TUSC3Q13454 348 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 TFDP1Q14186 410 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 PPP2R5DQ14738 602 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 PABPC1LQ4VXU2 614 aaKnown RBP15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 OTUD6AQ7L8S5 288 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 ZNF687Q8N1G0 1237 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 DAGLBQ8NCG7 672 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 BRF1Q92994 677 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 MTRQ99707 1265 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 APOL6Q9BWW8 343 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 SLC26A6Q9BXS9 759 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 KCNMB3Q9NPA1 279 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 AVENQ9NQS1 362 aaPredicted RBP15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 GDE1Q9NZC3 331 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 DDX25Q9UHL0 483 aaKnown RBP15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 FAM208BQ5VWN6 2430 aa15.84■□□□□ 0.13
PRPF40A-211ENST00000493468 INO80B-WBP1J3KQ70 363 aa15.83■□□□□ 0.12
PRPF40A-211ENST00000493468 SPEM2Q0P670 501 aa15.83■□□□□ 0.12
PRPF40A-211ENST00000493468 RAB33AQ14088 237 aa15.83■□□□□ 0.12
PRPF40A-211ENST00000493468 SLC27A1Q6PCB7 646 aa15.83■□□□□ 0.12
PRPF40A-211ENST00000493468 Q6ZUG5 572 aa15.83■□□□□ 0.12
PRPF40A-211ENST00000493468 SLC7A14Q8TBB6 771 aa15.83■□□□□ 0.12
PRPF40A-211ENST00000493468 LXNQ9BS40 222 aa15.83■□□□□ 0.12
PRPF40A-211ENST00000493468 AGXT2Q9BYV1 514 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms