RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 PFKPQ01813 784 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 HSP90AA2PQ14568 343 aaPredicted RBP19.63■□□□□ 0.73
NUP50-218ENST00000493456 MLF2Q15773 248 aaPredicted RBP19.63■□□□□ 0.73
NUP50-218ENST00000493456 RTP2Q5QGT7 225 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 NCAPH2Q6IBW4 605 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 PARM1Q6UWI2 310 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 RSPO2Q6UXX9 243 aaPredicted RBP19.63■□□□□ 0.73
NUP50-218ENST00000493456 GRASPQ7Z6J2 395 aaPredicted RBP19.63■□□□□ 0.73
NUP50-218ENST00000493456 DCLK2Q8N568 766 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 HAS1Q92839 578 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 DYDC2Q96IM9 177 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 SPATA6Q9NWH7 488 aaPredicted RBP19.63■□□□□ 0.73
NUP50-218ENST00000493456 RGL1Q9NZL6 768 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 MYH15Q9Y2K3 1946 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 CCNT1O60563 726 aaKnown RBP19.62■□□□□ 0.73
NUP50-218ENST00000493456 XYLBO75191 536 aa19.62■□□□□ 0.73
NUP50-218ENST00000493456 SDHBP21912 280 aa19.62■□□□□ 0.73
NUP50-218ENST00000493456 AKAP5P24588 427 aa19.62■□□□□ 0.73
NUP50-218ENST00000493456 SNW1Q13573 536 aaKnown RBP19.62■□□□□ 0.73
NUP50-218ENST00000493456 CAPSQ13938 189 aa19.62■□□□□ 0.73
NUP50-218ENST00000493456 TOB2Q14106 344 aaPredicted RBP19.62■□□□□ 0.73
NUP50-218ENST00000493456 PRSS55Q6UWB4 352 aaPredicted RBP19.62■□□□□ 0.73
NUP50-218ENST00000493456 GPR161Q8N6U8 529 aaKnown RBP19.62■□□□□ 0.73
NUP50-218ENST00000493456 ZNF274Q96GC6 653 aaPredicted RBP19.62■□□□□ 0.73
NUP50-218ENST00000493456 AIFM3Q96NN9 605 aa19.62■□□□□ 0.73
NUP50-218ENST00000493456 TTPALQ9BTX7 342 aa19.62■□□□□ 0.73
NUP50-218ENST00000493456 RPP25Q9BUL9 199 aaKnown RBP19.62■□□□□ 0.73
NUP50-218ENST00000493456 PCDHGA2Q9Y5H1 932 aa19.62■□□□□ 0.73
NUP50-218ENST00000493456 PATJQ8NI35 1801 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 LRRN2O75325 713 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 DGAT1O75907 488 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 C8AP07357 584 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 POU2F2P09086 479 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 CYP4A11Q02928 519 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 SPIRE1Q08AE8 756 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 TUSC3Q13454 348 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 CTTNQ14247 550 aaKnown RBP19.61■□□□□ 0.73
NUP50-218ENST00000493456 RSPO4Q2I0M5 234 aaPredicted RBP19.61■□□□□ 0.73
NUP50-218ENST00000493456 PPM1LQ5SGD2 360 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 VARS2Q5ST30 1063 aaKnown RBP19.61■□□□□ 0.73
NUP50-218ENST00000493456 PDXDC1Q6P996 788 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 RUFY3Q7L099 469 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 SKAP1Q86WV1 359 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 SLFN12Q8IYM2 578 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 ST13P5Q8NFI4 369 aaPredicted RBP19.61■□□□□ 0.73
NUP50-218ENST00000493456 ASAP3Q8TDY4 903 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 PIK3R5Q8WYR1 880 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 FGF13Q92913 245 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 PHF20Q9BVI0 1012 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 NCDNQ9UBB6 729 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 PARP2Q9UGN5 583 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 CACNA1IQ9P0X4 2223 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 EPG5Q9HCE0 2579 aa19.61■□□□□ 0.73
NUP50-218ENST00000493456 A0A1B0GUA9 196 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 ZBTB39O15060 712 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 LYPLA2O95372 231 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 BAG4O95429 457 aaKnown RBP19.6■□□□□ 0.73
NUP50-218ENST00000493456 NPTXRO95502 500 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 XBP1P17861 261 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 ARL2P36404 184 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 ELAVL2Q12926 359 aaKnown RBP19.6■□□□□ 0.73
NUP50-218ENST00000493456 UBXN2BQ14CS0 331 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 PSMD5Q16401 504 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 SLC44A4Q53GD3 710 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 CENPQQ7L2Z9 268 aaPredicted RBP19.6■□□□□ 0.73
NUP50-218ENST00000493456 TPH2Q8IWU9 490 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 SECISBP2LQ93073 1101 aaKnown RBP19.6■□□□□ 0.73
NUP50-218ENST00000493456 CLSTN3Q9BQT9 956 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 KCNJ14Q9UNX9 436 aa19.6■□□□□ 0.73
NUP50-218ENST00000493456 GPR179Q6PRD1 2367 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 B4GALT5O43286 388 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 SLITRK3O94933 977 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 REC8O95072 547 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 NTHL1P78549 312 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 POTEDQ86YR6 584 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 LNX1Q8TBB1 728 aaPredicted RBP19.59■□□□□ 0.73
NUP50-218ENST00000493456 ATRIPQ8WXE1 791 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 RABGGTAQ92696 567 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 PRIMPOLQ96LW4 560 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 CCDC43Q96MW1 224 aaKnown RBP19.59■□□□□ 0.73
NUP50-218ENST00000493456 ZSWIM6Q9HCJ5 1215 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 LTB4R2Q9NPC1 389 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 ANKEF1Q9NU02 776 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 KLK14Q9P0G3 267 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 KCNH3Q9ULD8 1083 aa19.59■□□□□ 0.73
NUP50-218ENST00000493456 FAM170BA6NMN3 283 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 CCL16O15467 120 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 CDKL5O76039 1030 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 KIF4AO95239 1232 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 GLRA2P23416 452 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 UVSSAQ2YD98 709 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 FAM171A1Q5VUB5 890 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 PIK3AP1Q6ZUJ8 805 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 RTL10Q7L3V2 364 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 HASPINQ8TF76 798 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 PAAF1Q9BRP4 392 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 ZSCAN32Q9NX65 697 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 POLIQ9UNA4 740 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 CYP46A1Q9Y6A2 500 aa19.58■□□□□ 0.72
NUP50-218ENST00000493456 ZFHX4Q86UP3 3567 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms