RNA–Protein interactions for RNA: ENST00000493427.1

ABCD4-215, Transcript of ATP binding cassette subfamily D member 4, human

TSL 4

Gene ABCD4, Length 736 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-215	ENST00000493427	MAP4K3	Q8IVH8	894 aa		13.92	□□□□□ -0.18
ABCD4-215	ENST00000493427	HDDC3	Q8N4P3	179 aa		13.92	□□□□□ -0.18
ABCD4-215	ENST00000493427	SEPT1	Q8WYJ6	367 aa		13.92	□□□□□ -0.18
ABCD4-215	ENST00000493427	CAMK1G	Q96NX5	476 aa		13.92	□□□□□ -0.18
ABCD4-215	ENST00000493427	UBAC1	Q9BSL1	405 aa		13.92	□□□□□ -0.18
ABCD4-215	ENST00000493427	KAT14	Q9H8E8	782 aa		13.92	□□□□□ -0.18
ABCD4-215	ENST00000493427	MBD1	Q9UIS9	605 aa	Predicted RBP	13.92	□□□□□ -0.18
ABCD4-215	ENST00000493427	FLNC	Q14315	2725 aa		13.92	□□□□□ -0.18
ABCD4-215	ENST00000493427	ADAMTS9	Q9P2N4	1935 aa		13.92	□□□□□ -0.18
ABCD4-215	ENST00000493427	FBN3	Q75N90	2809 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	ERVH48-1	M5A8F1	160 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	NRG2	O14511	850 aa	Predicted RBP	13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	SLC27A2	O14975	620 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	C6	P13671	934 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	ANTXR2	P58335	489 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	GHRHR	Q02643	423 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	TRDN	Q13061	729 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	TRIP6	Q15654	476 aa	Known RBP	13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	LILRA6	Q6PI73	481 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	NCOA7	Q8NI08	942 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	PIGK	Q92643	395 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	HHIP	Q96QV1	700 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	PCYT2	Q99447	389 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	SENP2	Q9HC62	589 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	ANO2	Q9NQ90	1003 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	EVL	Q9UI08	416 aa	Predicted RBP	13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	SLC8A2	Q9UPR5	921 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	STK24	Q9Y6E0	443 aa		13.91	□□□□□ -0.18
ABCD4-215	ENST00000493427	USP9Y	O00507	2555 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	VTN	P04004	478 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	RPL17	P18621	184 aa	Known RBP	13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	KLRC1	P26715	233 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	KARS	Q15046	597 aa	Known RBP	13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	PABPC1L	Q4VXU2	614 aa	Known RBP	13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	PPM1L	Q5SGD2	360 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	GPATCH4	Q5T3I0	446 aa	Known RBP	13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	IFIT1B	Q5T764	474 aa	Known RBP	13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	CREB3L3	Q68CJ9	461 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	PMS2CL	Q68D20	193 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	TXNDC11	Q6PKC3	985 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	GLB1L	Q6UWU2	654 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	RALYL	Q86SE5	291 aa	Known RBP	13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	ADGRF4	Q8IZF3	695 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	B3GALT6	Q96L58	329 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	SENP7	Q9BQF6	1050 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	NUSAP1	Q9BXS6	441 aa	Known RBP	13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	FSCN3	Q9NQT6	498 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	INVS	Q9Y283	1065 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	MRPS23	Q9Y3D9	190 aa	Known RBP	13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	POLQ	O75417	2590 aa		13.9	□□□□□ -0.18
ABCD4-215	ENST00000493427	SLC38A8	A6NNN8	435 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	MEIS3P2	A8K0S8	358 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	XYLB	O75191	536 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	GPR32	O75388	356 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	CEBPB	P17676	345 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	EIF2S3	P41091	472 aa	Known RBP	13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	DSG1	Q02413	1049 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	LY6D	Q14210	128 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	LIN9	Q5TKA1	542 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	LRRC69	Q6ZNQ3	347 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	TRPV5	Q9NQA5	729 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	CHST12	Q9NRB3	414 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	MARCH5	Q9NX47	278 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	FBXW11	Q9UKB1	542 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	KCNH3	Q9ULD8	1083 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	FAN1	Q9Y2M0	1017 aa		13.89	□□□□□ -0.19
ABCD4-215	ENST00000493427	IFIT3	O14879	490 aa	Known RBP	13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	DDHD2	O94830	711 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	C8A	P07357	584 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	IL12RB1	P42701	662 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	HNRNPD	Q14103	355 aa	Known RBP	13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	SLC5A9	Q2M3M2	681 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	ASPRV1	Q53RT3	343 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	TOGARAM2	Q6ZUX3	1019 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	ZNF710	Q8N1W2	664 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	IGDCC4	Q8TDY8	1250 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	GTPBP2	Q9BX10	602 aa	Known RBP	13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	ZFP14	Q9HCL3	533 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	POLM	Q9NP87	494 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	GDE1	Q9NZC3	331 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	PKD2L1	Q9P0L9	805 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	DNMT3B	Q9UBC3	853 aa	Known RBP	13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	VWA8	A3KMH1	1905 aa		13.88	□□□□□ -0.19
ABCD4-215	ENST00000493427	NRP1	O14786	923 aa		13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	DHX16	O60231	1041 aa	Known RBP	13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	ATP9A	O75110	1047 aa		13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	STAM2	O75886	525 aa		13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	PARP1	P09874	1014 aa	Known RBP	13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	FGFR4	P22455	802 aa		13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	DHPS	P49366	369 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	KPNA1	P52294	538 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	CCIN	Q13939	588 aa		13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	PON2	Q15165	354 aa		13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	PDXDC1	Q6P996	788 aa		13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	CASC1	Q6TDU7	716 aa		13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	VIT	Q6UXI7	678 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms