RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 PCIF1Q9H4Z3 704 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 RPF1Q9H9Y2 349 aaKnown RBP12.59□□□□□ -0.39
LSM2-214ENST00000493387 PLEKHA5Q9HAU0 1116 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 TOPORSQ9NS56 1045 aaPredicted RBP12.59□□□□□ -0.39
LSM2-214ENST00000493387 GIT1Q9Y2X7 761 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.59□□□□□ -0.39
LSM2-214ENST00000493387 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 ZBBXA8MT70 800 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 SLC16A3O15427 465 aaKnown RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 PSMC2P35998 433 aaKnown RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 ZNF165P49910 485 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 PMS1P54277 932 aaKnown RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 EPHB4P54760 987 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 WDR5P61964 334 aaKnown RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 ENPEPQ07075 957 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 SURF1Q15526 300 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 TCTN1Q2MV58 587 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 C11orf57Q6ZUT1 292 aaPredicted RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 OTOP2Q7RTS6 562 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 ZNF598Q86UK7 904 aaKnown RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 FAM114A1Q8IWE2 563 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 SMG8Q8ND04 991 aaKnown RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 PHOSPHO2Q8TCD6 241 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 DUSP9Q99956 384 aaKnown RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.58□□□□□ -0.4
LSM2-214ENST00000493387 FAM213AQ9BRX8 229 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 HAPLN2Q9GZV7 340 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 METTL14Q9HCE5 456 aaKnown RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 PARP2Q9UGN5 583 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.4
LSM2-214ENST00000493387 LTBP2Q14767 1821 aa12.58□□□□□ -0.4
LSM2-214ENST00000493387 TRIM49BA6NDI0 452 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 BECN2A8MW95 431 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 IKBKBO14920 756 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 FAM189A1O60320 539 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 IL18RAPO95256 599 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 BMP8BP34820 402 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 ACOT2P49753 483 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 MYL5Q02045 173 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 SNRNP35Q16560 246 aaKnown RBP12.57□□□□□ -0.4
LSM2-214ENST00000493387 CEP135Q66GS9 1140 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 GLB1LQ6UWU2 654 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 BRSK2Q8IWQ3 736 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 RNF169Q8NCN4 708 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 TOP1MTQ969P6 601 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 SAAL1Q96ER3 474 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 SLC9A7Q96T83 725 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 GDF15Q99988 308 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 SRRTQ9BXP5 876 aaKnown RBP12.57□□□□□ -0.4
LSM2-214ENST00000493387 UBE2OQ9C0C9 1292 aaKnown RBP12.57□□□□□ -0.4
LSM2-214ENST00000493387 NXF3Q9H4D5 531 aaKnown RBP12.57□□□□□ -0.4
LSM2-214ENST00000493387 THAP9Q9H5L6 903 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 ASB7Q9H672 318 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 RSAD1Q9HA92 442 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 SNTG2Q9NY99 539 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 KANSL3Q9P2N6 904 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 MAGEC2Q9UBF1 373 aaPredicted RBP12.57□□□□□ -0.4
LSM2-214ENST00000493387 SLC4A7Q9Y6M7 1214 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 TTC3P53804 2025 aa12.57□□□□□ -0.4
LSM2-214ENST00000493387 GOLGA8IPA6NC78 632 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 GOLGA8JA6NMD2 632 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 RECQL4O94761 1208 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 ADRB2P07550 413 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 KRT13P13646 458 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 ATF7P17544 494 aaPredicted RBP12.56□□□□□ -0.4
LSM2-214ENST00000493387 OSTNP61366 133 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 TPM4P67936 248 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 PPP2R3AQ06190 1150 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 RASIP1Q5U651 963 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 CRELD2Q6UXH1 353 aaPredicted RBP12.56□□□□□ -0.4
LSM2-214ENST00000493387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.56□□□□□ -0.4
LSM2-214ENST00000493387 AGMOQ6ZNB7 445 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 LRRC55Q6ZSA7 311 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 INTS8Q75QN2 995 aaKnown RBP12.56□□□□□ -0.4
LSM2-214ENST00000493387 FRMD5Q7Z6J6 570 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 NT5DC4Q86YG4 428 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 FAM186BQ8IYM0 893 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 ABI1Q8IZP0 508 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 FAM200AQ8TCP9 573 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 URGCPQ8TCY9 931 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 TMC2Q8TDI7 906 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 MFSD14AQ96MC6 490 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 RPS6KC1Q96S38 1066 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 APOL6Q9BWW8 343 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 RBAKQ9NYW8 714 aaPredicted RBP12.56□□□□□ -0.4
LSM2-214ENST00000493387 NFE2L3Q9Y4A8 694 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 HES2Q9Y543 173 aa12.56□□□□□ -0.4
LSM2-214ENST00000493387 TTC26A0AVF1 554 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 INPPL1O15357 1258 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 XPOTO43592 962 aaKnown RBP12.55□□□□□ -0.4
LSM2-214ENST00000493387 AKAP3O75969 853 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 PRKCSHP14314 528 aaPredicted RBP12.55□□□□□ -0.4
LSM2-214ENST00000493387 AKAP5P24588 427 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 CYP24A1Q07973 514 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 PSMD6Q15008 389 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 ENOX2Q16206 610 aaKnown RBP12.55□□□□□ -0.4
LSM2-214ENST00000493387 SLC10A6Q3KNW5 377 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 CCDC40Q4G0X9 1142 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 XKR4Q5GH76 650 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms